Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1709 ATGGATCTTCCTTCTAAAAATTCACCATCTCTTCCCTCCGTTGCCGCCGACGTCAACGGCGACAACCTAAAACCGAAGAAGCAGCGAGGTAGGCCAAAAGGTTCTAAGAACAAGCCGAAGTCACAACCACAAATATTTTCTGCCAACAATTCATCTTTGAGAGACTCCATCGACGTCATCCACGTCCCTCCCGGCGCTGACATATTAGATTGTTTGCGCGAGTACTCACATAGTCGACAGAAGAACATCACCGTGTTATTTGCCTCCGGATTGGTCTCCCAAGTCTCTGTCCGTCCCTTTCTTACTTATTCTCCACCACACATGATATCCGTACCCGGACCCGTACCCGTGTTATTTTTCTCCGGCTCTATTCTGCTCGAGATCACATCGCCTCATTCGTTATCTATCTGTGTTCCGGGGTGTCAAGGACAAATAGTTTATGGACTCATTGGAGGAAGTGTTATAGCTAGGAGCATTGTGACGATAGTGATAGTAGCCAATAAGGATGAAGATAAAAGAAGTAATAGTGGTGACAAAATAGAATTTAAGAATTATATGATGATAGGTGATAAGCATGAGGTTGATAATAATAAACCGAATGCTATAACTATTTCGACCCCTGAGGTTAAAGATAATATATGA 642 0.433 MDLPSKNSPSLPSVAADVNGDNLKPKKQRGRPKGSKNKPKSQPQIFSANNSSLRDSIDVIHVPPGADILDCLREYSHSRQKNITVLFASGLVSQVSVRPFLTYSPPHMISVPGPVPVLFFSGSILLEITSPHSLSICVPGCQGQIVYGLIGGSVIARSIVTIVIVANKDEDKRSNSGDKIEFKNYMMIGDKHEVDNNKPNAITISTPEVKDNI 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1709 213 ProSiteProfiles PPC domain profile profile. 50 188 IPR005175 -
Sto9g1709 213 Pfam Plants and Prokaryotes Conserved (PCC) domain 59 165 IPR005175 -
Sto9g1709 213 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 19 168 IPR014476 GO:0003680
Sto9g1709 213 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 168 - -
Sto9g1709 213 MobiDBLite consensus disorder prediction 1 15 - -
Sto9g1709 213 MobiDBLite consensus disorder prediction 1 47 - -
Sto9g1709 213 Gene3D - 57 185 - -
Sto9g1709 213 CDD DUF296 59 164 IPR005175 -
Sto9g1709 213 SUPERFAMILY AF0104/ALDC/Ptd012-like 59 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1709 Sto-Chr9 21495247 21495888 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1709 21 166 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 29.730 1.77e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1709 - - csv:101217818 96.6709