Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1678 ATGGAAGGCATTGTTGGGGATCGTACAGGTGAAGGGATTGGGCTGCGTAATCTATGCGATTCACGCAGAGTTGTACATCGGGGCTTAGTTGGAATGGTGTGTGTGAATGATCCCAACTTCCTCGACGACGGCGACGGCGGCGACCACTCCAATTGCTCCTCCTCCGCCTTGCCTCGCTACTTCCTCTACCCGTTCAATTTCTCCGGATCTCCGAGATTTTCCTTCTTCCGGAAGCAAGACGGCCTGTACGCGAGTACTACGATCTCCGATTTATCGAGAAATGTGGTGTATTACAACTGTTCGGTTCCGGTGAAGGAGGATGAGAATTTTGGGGGAGGAGCTCCGTGCTTGGATCCCCATATCTACGTCACTCCGCGGGATATAAGGTTGTCCGATGTGAAGACTGGGTGTCACGTGATCGCCGCCACGCTCTCCTCGTGGCGCAGCCCTCGTTATTATCGCAGTGATGGTGGAGCTTGGTACAAGTTTGTGAGGTATACCCCAGCGATGTTTTATGTAATAACACTTCATCAACCTTCAGACAATATTTCACCACCATTTGAACCATACTTATATTACCCAATGCTCAACGCATGGTATGTATTGGCATCACTTGTGGCTCTTAGAGTTTTCTTTGGAGTATTGCTTTCGGCATCGCTATTGATTTTCAAATGGAGAAGAAGACACTTGTCCGTGTACCAAAACATTGAACAATTTCTGCAAGGGAATTATAATGACCTTATGCCCATAAGGTACTCCtataaagaaattaagaatATGACGAGAGGTTTCAAGGATAAGTTAGGTGAAGGAGGGTTCGGGACGGTGTACAAAGGAAAATTGCGTAGCGGCCATTATGTGGCGATCAAAATGTTGGGTAAATCGAAGGCTAACGGCCAAGAATTTACTAGCGAAGTGGCGACTATCGGAAGGATACAccattttaacgtggttcgtcTCGTAGGGTTTTGTGTGGAAGGATCGAGACGTGCTCTTGTCTACGAGTTCATGTCCAATGGCTCTCTCgataaatttattttctccAAAGAAGGAAGCGTCCCTCTGAGCTACGAGAAAGTACATGAGATCTGCCTTGGAGTGGCTCGTGGGATTGTTTATCTTCATCATGGTTGTGACATGCAGATTCTGCATTTTGACATCAAGCCTCACAACATCCTCCTCGACGACGACTTCGTCCCAAAGGTTGCTGACTTCGGGCTAGCGAGGTTGTATCCGGTGGACGACAGCGTCGTCACTCTGACTGCGGCGAGGGGAACAATAGGATACATGGCTCCTGAGTTGTTCTACAAGAACGTCGGGGGGGTGTCGTACAAGTCCGATGTCTATAGTTTCGGAATGCTGCTGATGGAAATGACGAGTATGAGGAGGAATCTGAATCCTCAGGCGGAGCGTTCGAGCCAGCTATACTTCCCGTTGTGGGTTTACGACCAATTCAATGAAGAGAAAGATATTGAGGCCATGGAAGAATTGACACAGGAAGAAAAGGATTTGGCGAAGAAGATGTTTATAATCGCGTTGTGGTGTATACAACTGAAGCCTAGTGATCGCCCCTCCATGAAAAGAGTGGTGGAGATGTTGGAAGGGGAAGTTGAAGACATTGAAATGCCTCCAAAGCCATTGTTGTATCCTCGTGAAACAGTTATGGAGGATCATGGGTCTGACTACGATGACCAAACATCATCCAGTGACGACACACAGCATTCTCTCAATTATGCTGGTGATGTTGTTGACCATGGGGAAGAATAA 1767 0.4641 MEGIVGDRTGEGIGLRNLCDSRRVVHRGLVGMVCVNDPNFLDDGDGGDHSNCSSSALPRYFLYPFNFSGSPRFSFFRKQDGLYASTTISDLSRNVVYYNCSVPVKEDENFGGGAPCLDPHIYVTPRDIRLSDVKTGCHVIAATLSSWRSPRYYRSDGGAWYKFVRYTPAMFYVITLHQPSDNISPPFEPYLYYPMLNAWYVLASLVALRVFFGVLLSASLLIFKWRRRHLSVYQNIEQFLQGNYNDLMPIRYSYKEIKNMTRGFKDKLGEGGFGTVYKGKLRSGHYVAIKMLGKSKANGQEFTSEVATIGRIHHFNVVRLVGFCVEGSRRALVYEFMSNGSLDKFIFSKEGSVPLSYEKVHEICLGVARGIVYLHHGCDMQILHFDIKPHNILLDDDFVPKVADFGLARLYPVDDSVVTLTAARGTIGYMAPELFYKNVGGVSYKSDVYSFGMLLMEMTSMRRNLNPQAERSSQLYFPLWVYDQFNEEKDIEAMEELTQEEKDLAKKMFIIALWCIQLKPSDRPSMKRVVEMLEGEVEDIEMPPKPLLYPRETVMEDHGSDYDDQTSSSDDTQHSLNYAGDVVDHGEE 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1678 588 SMART serkin_6 262 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1678 588 Gene3D Phosphorylase Kinase; domain 1 239 336 - -
Sto9g1678 588 SUPERFAMILY Protein kinase-like (PK-like) 246 534 IPR011009 -
Sto9g1678 588 MobiDBLite consensus disorder prediction 543 588 - -
Sto9g1678 588 Gene3D Transferase(Phosphotransferase) domain 1 337 542 - -
Sto9g1678 588 MobiDBLite consensus disorder prediction 551 568 - -
Sto9g1678 588 CDD STKc_IRAK 268 535 - -
Sto9g1678 588 PANTHER RUST RESISTANCE KINASE LR10-RELATED 200 563 IPR045874 GO:0004672
Sto9g1678 588 PANTHER RUST RESISTANCE KINASE LR10-RELATED 48 150 IPR045874 GO:0004672
Sto9g1678 588 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 48 150 - -
Sto9g1678 588 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 200 563 - -
Sto9g1678 588 Pfam Protein kinase domain 265 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1678 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 382 394 IPR008271 GO:0004672|GO:0006468
Sto9g1678 588 ProSitePatterns Protein kinases ATP-binding region signature. 268 290 IPR017441 GO:0005524
Sto9g1678 588 ProSiteProfiles Protein kinase domain profile. 262 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1678 Sto-Chr9 21255352 21262022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1678 172 576 Receptor kinase-like Gene Family AT4G18250 43.437 1.57e-105 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto9g1678 PK_Tyr_Ser-Thr 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1678 - - cam:101508554 542.347