Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1670 ATGGGCAATTGTTGCTCTGGGGGCGATACCGATGCCCCGGTAGCCGATCCCGGAACTACCGAGCCCGCCGCCAAGGGAGGATCCATGAACAAACCTCCATCTAGCAACAACCACGAATCGAAAGGAGGGAACAGCAGCCGTGTGGGTGGCGGTGATAGCCGTGGCGACAATTCGGCCACAACCCCAGCCAAAGCATCCCCTCCTCCCGCAGCAGCGAAACCCACGAAACAAGGCCCAATGGGCCCTGTCCTCCAACGGCCCATGGAGGACGTGAAGGCGACATACAACGTGGGGAAGGAGCTAGGGAGAGGGCAATTCGGCGTGACGCACCTGTGCACGCACAAGGCCACCGGGCAGCAGTTCGCGTGCAAGACGATCGCGAAGCGGAAGCTGACGAACGCGGCGGACATCGAGGACGTACGGAGGGAGGTCCAGATCATGCACCACCTTGCGGGGCAAGCCAACGTGGTGGAGTTGAAGGGTGCATTCGAGGACAAGCATTCGGTTCATCTGGTGATGGAGCTATGCGCCGGGGGAGAGCTATTCGACCGGATCATAGCCAAGGGGCATTACACGGAGCGCGCCGCCGCCTCCTTGTTGAGGACAATCGTGCAAACCGTGCACACTTGTCACTCCATGGGTGTCATTCACAGAGATCTCAAACCCGAGAATTTCTTGCTCTTGAATAAGGAAGAAGATTCTCCTCTCAAGGTCAATGATTTCGGTTTATCCGTTTTCTTCAAAGaagGAGAAACATTCAAAGATATAGTTGGAAGTGCATATTATATTGCTCCAGAAGTGTTGAAGAGGAAATATGGGCCAGAAGTTGATATTTGGAGTATTGGTGTCATGTTGTACATTCTTCTATCTGGTGTTCCTCCATTTTGGGCAGAATCGGAGAATGGTATATTCAATGCAATCTTAAGAGGGCACGTAGACTTCTCAGCAGATCCATGGCCGTCCATTTCACCATCAGCTAAAGATCTTGTCAGAAAAATGTTGAATTCTGATCCCAAGGCCAGGCTCACTGCCTACCAAGTTCtaaATCATCCATGGATTAAGGAGGATGGAGAGGCACCTGATAAGCCACTTGACAATGTTGTCATGAACAGACTCAAACAATTCACAGCAATGAACCAATTCAAGAAAGTGATTGCTGGGAACTTGTCAGAGGAAGAAATCATGGGATTGAAGGAAATGTTCAGAAGCATGGATACAGATAATAGTGGAACCATAACCATTGAAGAGCTCAGGCATGGCCTTACCAAACCAGGCACAAAGTTGTCTGAACAAGAAGTTGAGCAATTAATGGAAGCTgCTGATGCTGATGGCAATGGACTAATAGATTATGACGAGTTCATCACAGCAACAATGCACTTGAACCGAATGAACAAAGAAGAACATCTTTATGCTGCTTTCCAATACTTTGATAAAGATAACAgcgggTTCATTACAAAAGAAGAACTAGAGCAAGCTCTTCGTGAATTTAACATGAATGATGGAAGGGACATCAATGAAGTCATTTCAGAAATTGATGCAGATAATGATGGAAGGATTGACTATGAAGAATTTGTGGCAATGATGAAGAAAGGAAACCCAGAAGCTATGACTGCCAAAAAGAGGCGTGACTCCTATGTTTGA 1641 0.4778 MGNCCSGGDTDAPVADPGTTEPAAKGGSMNKPPSSNNHESKGGNSSRVGGGDSRGDNSATTPAKASPPPAAAKPTKQGPMGPVLQRPMEDVKATYNVGKELGRGQFGVTHLCTHKATGQQFACKTIAKRKLTNAADIEDVRREVQIMHHLAGQANVVELKGAFEDKHSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQTVHTCHSMGVIHRDLKPENFLLLNKEEDSPLKVNDFGLSVFFKEGETFKDIVGSAYYIAPEVLKRKYGPEVDIWSIGVMLYILLSGVPPFWAESENGIFNAILRGHVDFSADPWPSISPSAKDLVRKMLNSDPKARLTAYQVLNHPWIKEDGEAPDKPLDNVVMNRLKQFTAMNQFKKVIAGNLSEEEIMGLKEMFRSMDTDNSGTITIEELRHGLTKPGTKLSEQEVEQLMEAADADGNGLIDYDEFITATMHLNRMNKEEHLYAAFQYFDKDNSGFITKEELEQALREFNMNDGRDINEVISEIDADNDGRIDYEEFVAMMKKGNPEAMTAKKRRDSYV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1670 546 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 43 537 - -
Sto9g1670 546 ProSiteProfiles EF-hand calcium-binding domain profile. 392 427 IPR002048 GO:0005509
Sto9g1670 546 Pfam EF-hand domain pair 397 457 IPR002048 GO:0005509
Sto9g1670 546 Pfam EF-hand domain pair 466 529 IPR002048 GO:0005509
Sto9g1670 546 MobiDBLite consensus disorder prediction 1 85 - -
Sto9g1670 546 Coils Coil 546 546 - -
Sto9g1670 546 ProSiteProfiles Protein kinase domain profile. 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1670 546 ProSiteProfiles EF-hand calcium-binding domain profile. 464 499 IPR002048 GO:0005509
Sto9g1670 546 SMART serkin_6 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1670 546 SUPERFAMILY Protein kinase-like (PK-like) 81 381 IPR011009 -
Sto9g1670 546 Pfam Protein kinase domain 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1670 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Sto9g1670 546 MobiDBLite consensus disorder prediction 29 64 - -
Sto9g1670 546 ProSitePatterns EF-hand calcium-binding domain. 405 417 IPR018247 -
Sto9g1670 546 Gene3D Phosphorylase Kinase; domain 1 97 181 - -
Sto9g1670 546 ProSitePatterns EF-hand calcium-binding domain. 441 453 IPR018247 -
Sto9g1670 546 Gene3D - 462 545 - -
Sto9g1670 546 ProSiteProfiles EF-hand calcium-binding domain profile. 503 534 IPR002048 GO:0005509
Sto9g1670 546 ProSitePatterns EF-hand calcium-binding domain. 512 524 IPR018247 -
Sto9g1670 546 Gene3D - 391 461 - -
Sto9g1670 546 CDD STKc_CAMK 95 352 - -
Sto9g1670 546 SMART efh_1 396 424 IPR002048 GO:0005509
Sto9g1670 546 SMART efh_1 468 496 IPR002048 GO:0005509
Sto9g1670 546 SMART efh_1 503 531 IPR002048 GO:0005509
Sto9g1670 546 SMART efh_1 432 460 IPR002048 GO:0005509
Sto9g1670 546 SUPERFAMILY EF-hand 388 529 IPR011992 -
Sto9g1670 546 Gene3D Transferase(Phosphotransferase) domain 1 182 390 - -
Sto9g1670 546 ProSitePatterns EF-hand calcium-binding domain. 477 489 IPR018247 -
Sto9g1670 546 PANTHER SERINE/THREONINE-PROTEIN KINASE 43 537 - -
Sto9g1670 546 ProSiteProfiles EF-hand calcium-binding domain profile. 428 463 IPR002048 GO:0005509
Sto9g1670 546 ProSitePatterns Protein kinases ATP-binding region signature. 101 128 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1670 Sto-Chr9 21192144 21196772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1670 1 545 EF-hand Containing Proteins AT5G12180 75.228 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto9g1670 Pkinase 1.8e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1670 K13412 - gmx:100781355 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1670 9 21192144 21196772 Sto9g1670 9 21192144 21196772 ECH