Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1655 ATGTCTCCAAGAAATCAACTGATTTCTGCTATCGAACCAGAGGTTAAAGATCTTAGTGTGAAGGCTCGGGTTGTGAGGTTATGGTTTATGCCACCTTACAATAATAATGGTCCCAGTTCTGCATCTAATGGTGTTCAAATCCAAATGGTCCTCTGTGATCGCGAGAATAATACAATCGCCGCTTCTGTGAAAAGCATTTACCTCAACAAATtcaagagtgttttgaaagagGGTGGGGTTTACGTGCTGTCCAAATTCGCTGTTGTTACTAATGGTGGAAATTTTCGTGTCACAAACCATGTATATCAAATTAACTTTCAGTTTAGTACCCGTGTTGTGCCAGCCGTAGATGATTCATCCATACACCGTTTTGGGTTCAATTGGATTCCATTTGATTCTATTACGACAGGGCAGGCGCAACCAAGTACCTTAGTTGATGTAATCGGTCATATTACAAATATGTCTGATGTGCATGAATCAGCCAACGGTGACGGTGTCACAAAGAGAATCATAATTGACTTGGAAGACCGAGAGTTGTTTCAAAGCTGGTTGCACTGCGTCTTGCTGTTGACACCATTAAGTCATGCTTGA 591 0.4027 MSPRNQLISAIEPEVKDLSVKARVVRLWFMPPYNNNGPSSASNGVQIQMVLCDRENNTIAASVKSIYLNKFKSVLKEGGVYVLSKFAVVTNGGNFRVTNHVYQINFQFSTRVVPAVDDSSIHRFGFNWIPFDSITTGQAQPSTLVDVIGHITNMSDVHESANGDGVTKRIIIDLEDRELFQSWLHCVLLLTPLSHA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1655 196 Pfam Domain of unknown function DUF223 49 143 IPR003871 -
Sto9g1655 196 SUPERFAMILY Nucleic acid-binding proteins 8 122 IPR012340 -
Sto9g1655 196 Gene3D - 6 114 IPR012340 -
Sto9g1655 196 CDD RPA1_DBD_A_like 19 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1655 Sto-Chr9 21052153 21053219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1655 1 155 Core DNA Replication Machinery Family AT5G08020 23.718 3.74e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1655 - - aip:110263782 105.531