Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1614 ATGAAAAAGAAATTGGCTACGCGTTTCCCAGCTagATCATGCTATTCTGTTGAGGAATTGTCTCTGACATCATTTGATTGCTGTATTGAGGCTCGGATTAAGAAAATTATGCAAACTGATGAGGATATCGGGAAGATTGCTATGGCTGTGCCCCTCCTTGTTTCTAAAGCACTAGAACTCTTTCTGCAAGATTTATGTGATAGGACATATGAGATCACTTTGAGGAGAGGGGCGAAAACCATGAATTCTTATCATTTAAAACAGTGTGTACAGACTTTTAATGTCTTTGATTTTCTGAAAGATATTGTTGCCAAGGTTCCTGATTTGGGTGGACATGCTGCTACTGGAGATGATCGTACTGTCTGTAAGAGAAGgaAAGTTGATGATGATGGCAATGACAGTGATGATGAtacaaaaagaaataagatGCCGGAACATGGACATCATACTGGTGGTAGAGGaagaggtcgaggtagaggtagGGGTCGTGGGCGAGGAAGTAGAACAGCGGTAGATCGAGAGATGACTGCACAACATATCAAGTTTGAAGATGATCATGATCATCATAGTCATCCTGATGAATTGAAGCAAAATGACATGCACACTCAGAGCAATGAAAGCATGGAAAATGGGACTGAACATGACGAAGTGAAGCCTTCTGCAAGAAAAACATCAGAAGTGTCTGTTAGAAATTTCGACTTAAATATGGATCCAGACGAGGATGGGGATTCGCCCACTAGTTTAGCTCCCGCCCCACCAAGCATACCGGAAAAGCCAACTACAGAAGTGAGACTCGAGGAATTCCCCGGCTGGTCATTGTCTGATGTAGAAAAAATGGCCATTGATCCAATGCAACTAGTCAACTTAAATGGAAAAGTTgatgaagaagaggaagattaCGATGAAGAATGTTAG 915 0.3923 MKKKLATRFPARSCYSVEELSLTSFDCCIEARIKKIMQTDEDIGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSYHLKQCVQTFNVFDFLKDIVAKVPDLGGHAATGDDRTVCKRRKVDDDGNDSDDDTKRNKMPEHGHHTGGRGRGRGRGRGRGRGSRTAVDREMTAQHIKFEDDHDHHSHPDELKQNDMHTQSNESMENGTEHDEVKPSARKTSEVSVRNFDLNMDPDEDGDSPTSLAPAPPSIPEKPTTEVRLEEFPGWSLSDVEKMAIDPMQLVNLNGKVDEEEEDYDEEC 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1614 304 MobiDBLite consensus disorder prediction 124 151 - -
Sto9g1614 304 PANTHER HISTONE SUPERFAMILY PROTEIN 1 303 - -
Sto9g1614 304 MobiDBLite consensus disorder prediction 165 200 - -
Sto9g1614 304 MobiDBLite consensus disorder prediction 208 223 - -
Sto9g1614 304 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 90 IPR003958 -
Sto9g1614 304 MobiDBLite consensus disorder prediction 124 261 - -
Sto9g1614 304 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 303 - -
Sto9g1614 304 SUPERFAMILY Histone-fold 37 106 IPR009072 GO:0046982
Sto9g1614 304 Gene3D Histone, subunit A 30 105 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1614 Sto-Chr9 20482120 20485099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1614 1 293 CCAAT-HAP5 Transcription Factor Family AT3G12480 43.137 5.81e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Sto9g1614 CBFD_NFYB_HMF 5.2e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1614 K21752 - gmx:100814800 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1614 9 20482120 20485099 Sto9g1614 9 20482120 20485099 ECH