Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1594 ATGGCTATTGCAGCCCCTGGGCAGCTGAACCTCAACGAGTACCCTTCATGGGGATCCAGGAGTGTTGATTGCTTCGAAAAGTTGGAGCAGATTGGCGAGGGAACTTATgggtcaTTTCCTATTACTGCTATACGTGAAATCAAAATTCTAAAGAAATTACATCATGAAAATGTTATTAAGCTGAAAGAAATTGTGACATCGCCAGGCCCTGAGAAAGATGAGCAAGGAAGACCAGGTTTACCTCCTGAACTGCTTCTAGGAACAACAAAGTATGGACCAGCTGTTGATATGTGGTCTGTTGGGTGCATCTTTGCTGAGCTTCTTCATGGAAAGCCTATCTTCCCTGGGAAAGACGAGCCAGaacaactaaataaaatatttgagcTGTGTGGAGCGCCAGATGAGGTGAACTGGCCTGGGGTTTCCAAGTCTCCATGGTATAATCAGTTTAAGCCAACAAGACCGATGAAAAGACGTCTCAGGGAAGTTTTCAGACATTTTGATCGTCACGCTTTGGAATTGTTGGAGAGGATGCTGACACTTGATCCTGCTCAGAGAATTACTGCTAAGGATGCGCTAGATGCCGAGTATTTCTGGACTGATCCTTTGCCATGTGATCCCAAGAGTTTACCCAAGTATGAGTCGTCACACGAGTTTCAGACAAAGAAAAAGCGCCAGCAACAACgacaaaatgaagaaaatgccaAGCGTATGAAAATGCAGCACTCGCAGCAACACACACGTCTTCCCCCCATTCAGCAGCCAGGGCAGCCACACGGCCAAATGCGCCCTGGGCCTAACCAACCAATACATGGCTCTCAACCTCCAGTCGCTGCTGGGCATAGTCATCATTATGGGAAGCCTCGAGGTCCCTCTGGTGGACCAGGAAGATACCCCCCGAGTGGGAACCCTGGTGGCGGATACAATCACCCAAACCGTGGAGGCCAAGGCGGAGGCAGTGGTTACGGCAGTGGACCATATCCTCCTCAAGGCCGCGGAGCACCTTATGGTTCAAGTGGTATGCCAGGTGCTGGTCCTCGTGGTGGTGGTAGTGGATACGGAGTTGGAGCACCTAATTATCCCCAAGGTGGTCCTCCATACGGTGGATCAGCTGCTGGTCGTGGTTCGAACATGATGGGTGGAAACCGCAATCAACAGTACGGTTGGCAGCAGTAG 1176 0.4838 MAIAAPGQLNLNEYPSWGSRSVDCFEKLEQIGEGTYGSFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPGLPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKSPWYNQFKPTRPMKRRLREVFRHFDRHALELLERMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEENAKRMKMQHSQQHTRLPPIQQPGQPHGQMRPGPNQPIHGSQPPVAAGHSHHYGKPRGPSGGPGRYPPSGNPGGGYNHPNRGGQGGGSGYGSGPYPPQGRGAPYGSSGMPGAGPRGGGSGYGVGAPNYPQGGPPYGGSAAGRGSNMMGGNRNQQYGWQQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1594 391 Pfam Protein kinase domain 81 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1594 391 Gene3D Phosphorylase Kinase; domain 1 27 73 - -
Sto9g1594 391 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 6 37 - -
Sto9g1594 391 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 81 342 - -
Sto9g1594 391 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 38 72 - -
Sto9g1594 391 MobiDBLite consensus disorder prediction 209 391 - -
Sto9g1594 391 SUPERFAMILY Protein kinase-like (PK-like) 8 228 IPR011009 -
Sto9g1594 391 MobiDBLite consensus disorder prediction 377 391 - -
Sto9g1594 391 ProSiteProfiles Protein kinase domain profile. 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1594 391 SMART serkin_6 25 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1594 391 MobiDBLite consensus disorder prediction 211 240 - -
Sto9g1594 391 Gene3D Transferase(Phosphotransferase) domain 1 81 222 - -
Sto9g1594 391 PANTHER CELL DIVISION PROTEIN KINASE 38 72 - -
Sto9g1594 391 PANTHER CELL DIVISION PROTEIN KINASE 6 37 - -
Sto9g1594 391 PANTHER CELL DIVISION PROTEIN KINASE 81 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1594 Sto-Chr9 20279720 20289319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1594 1 78 Core Cell Cycle Gene Families AT5G10270 61.905 2.70e-29 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto9g1594 Pkinase 1.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1594 K08819 - gmx:100793565 450.284