Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto9g1576 | ATGGACGTGTCGCATGGTTCACCTGGGCAATCTGATATTCCTTCTATTGCTGCGGTTGTAAGTTCTCGACAATGGCCTTTGATCTCAAAGTATAGGGCATGTGTCCGAACTCAGTCTCCAAAGGTTGAAATGATTGATAATTTGTTCAAGCCAGTAGGCGAAAAGGAGGATGAAGGCATCATCAGGGAACTTTTAGTTGACTTCTACACAAGCTCCGGGAAGAGGAAGCCCGAAAACATAATCATTTTCAggtag | 255 | 0.4314 | MDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVGEKEDEGIIRELLVDFYTSSGKRKPENIIIFR | 84 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto9g1576 | 84 | SUPERFAMILY | Ribonuclease H-like | 1 | 84 | IPR012337 | - | |
| Sto9g1576 | 84 | PANTHER | BNAC09G36860D PROTEIN | 1 | 84 | - | - | |
| Sto9g1576 | 84 | Pfam | Piwi domain | 1 | 84 | IPR003165 | GO:0003676 | |
| Sto9g1576 | 84 | Gene3D | - | 1 | 84 | IPR036397 | GO:0003676 | |
| Sto9g1576 | 84 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 1 | 84 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto9g1576 | Sto-Chr9 | 20126109 | 20126767 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto9g1576 | 2 | 84 | Eukaryotic Initiation Factors Gene Family | AT1G48410 | 44.828 | 1.16e-15 | 68.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto9g1576 | K11593 | - | mus:103996994 | 155.221 |