Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1550 ATGGAGAGCCTTAAAGCAAAAGATATGTTTGAAGGTCAATCTCAATTGTATGGACTCATGTTCAATTACATTAGTTCCATGGGTCTCAAAGCTGCAATTGAGCTTGGCATAGCAGACATAATCCATAGCCATGGCCAACCCATTACTTTGCCTGACTTGGTCTTGGCACTTCACATTGACCCTTCAAAATCTTCCTTTCTTTATAGGCTAATGCGTTTGTTGGTTCATTCTGGCCTTTTTGCCAGATCCAAAGAAGGGTATGATCTCACACCTTGCTCTAGGCTTCTACTCAAACACAATGTCCCAAACCTAAGTTCAGTTGTTAAGGTAACATTTCAGCCAGCTGTGTCACAACCATTTCTAATGCTGGGAGAGTGGTTCCATAATGGTGAAGTGAATGTGAATCCTTTCGAGTCTGTGTTTGGGAAGGGGTTTTGGGAGTATGGGAGTGAGAATCCAGAGTTTGCTAAACTTTTCAATGAAGCTATGGTTAGTGATTCCCGGATGATGAACATGGTCATTAAGGATTGCAGAGATGTTTTCGAGGGTGTGAACTCGCTCGTTGATGTTGGAGGTGGTGTCGGAGAAGTTGCCAGAATCATTTCTCAGGAATTTCCAAACATGAAACTGACAGTGCTTGATCTTCCACATGTTGTTTCTGGTTTGGAAGATGGTCAAAATCTTAAGTTTGTTGGTGGTAATATGCTTCATGATTCTATTCCTTTGGCTGACGCCATACTTTTAAAgTTGGTTTTACATATTTACAATGATGAAGAATGTGTGAAGGTACTAAAGAAATGCAGAGAGGCGATTTCAGGAAAAGGCAAAGAAGGAAAAGTGATAATAATAGATTTGGTAATAAATGAGAAGAAGGACATGCATGAGCACACTCAAACCAAAATCTATTTTGATTTAGAGATGATGAATCAAACCACCGgtggaagagaaagagaagaaagtgAATGGGAGAAGATCTTTATAGAAGCTGGATTCTCTAGTTACAAGATCACATACATTTTTGGTCTAAAGTCCCTAATTCAAGTTTATCCTTAA 1053 0.3846 MESLKAKDMFEGQSQLYGLMFNYISSMGLKAAIELGIADIIHSHGQPITLPDLVLALHIDPSKSSFLYRLMRLLVHSGLFARSKEGYDLTPCSRLLLKHNVPNLSSVVKVTFQPAVSQPFLMLGEWFHNGEVNVNPFESVFGKGFWEYGSENPEFAKLFNEAMVSDSRMMNMVIKDCRDVFEGVNSLVDVGGGVGEVARIISQEFPNMKLTVLDLPHVVSGLEDGQNLKFVGGNMLHDSIPLADAILLKLVLHIYNDEECVKVLKKCREAISGKGKEGKVIIIDLVINEKKDMHEHTQTKIYFDLEMMNQTTGGREREESEWEKIFIEAGFSSYKITYIFGLKSLIQVYP 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1550 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 105 346 IPR029063 -
Sto9g1550 350 PIRSF O-mtase 1 350 IPR016461 GO:0008168
Sto9g1550 350 PANTHER ASMT2 5 350 - -
Sto9g1550 350 Gene3D - 1 96 IPR036388 -
Sto9g1550 350 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
Sto9g1550 350 Gene3D Vaccinia Virus protein VP39 98 350 IPR029063 -
Sto9g1550 350 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 350 IPR016461 GO:0008168
Sto9g1550 350 Pfam O-methyltransferase domain 122 332 IPR001077 GO:0008171
Sto9g1550 350 PANTHER O-METHYLTRANSFERASE 5 350 IPR016461 GO:0008168
Sto9g1550 350 SUPERFAMILY "Winged helix" DNA-binding domain 8 99 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1550 Sto-Chr9 19855637 19856826 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1550 27 336 Monolignol Biosynthesis Gene Families AT5G54160 30.650 1.21e-47 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1550 K22588 - qsu:112018723 416.387