Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1536 ATGCAGACAATCTGTTTGATGTTATTCTTGTTTGGGGTGACTGCATTAGGGAATTCAGATATTGACGCACTACTTGAACTCAAGAAGAGCATTCAGAATGACCCTTCTGGAGTAGTCCTTAATTCTTGGGATTCCAGGTCTTTAGCTTCTGATGGATGTCCTCAGAATTGGTATGGGATATTGTGTACTGAAGGCAATGTTATATCAATCATTCTGGATAATGTTGGTTTGGTTGGCGACTTTAACTTCCATGCTATTAACGGCCTTAAAATGCTTCGCAACTTGTCGGTTTCGAATAACCAGTTCGCAGGAAGTGTCTTACATTTGGGTCCATTGGAGTCACTTGAATCTCTTGATCTATCACTCAACAAGTTTCATGGGTTTGTACCCTCGAACTTGCTTGAATTACATAATTTAGTGCATTTGAATCTTTCTTCAAATCAATTTGAAGGTACTCTTCCTGCTGGCTTTGACAATCTTGATCGGTTGAAGTATTTAGATTTGCATGCTAATAGCTTTTCTGGGGATATTATGCACATTTTTTCTCATATCGGCAGTGTGGTTCATGTTGACCTAAGCAACAACAGGTTTTCTGGTTCACTGGATTTGGGACTTGGGAACAACTCGTTTCTCTCCTCAattcaatatttaaatattagcCACAATTCCTTGATTGGTCAGCTGTTTGCCCATGATGGGATGCCATACCTCGACAATTTGGAGGTCTTTGATGCTAGTTATAATCAGCTAGTCGGTAATATACCTTCCTTCACATTTGTGGTATCTCTTCGGATTCTTCGGCTTGGATGCAACCAGTTATCGGGTTCTCTACCAGAAGGTTTATTGAAGGAAAGTTCAACAACGTTGTCTGAATTGGATCTTAGTCAAAACAAACTTGAAGGTCCCATTGGAAGCATTACCTCTGTAACTCTGAAGAAGCTTAATATATCTTCAAACAAATTGTCAGGCCCTTTACCTCTCAGGGTAGGCCACTGCGCCATAATAGATTTAAGTAATAACTTGCTGTCAGGTAATTTGTCCAGGATACAGTATTGGGGTAATTACGTCGAGGTGATCCAGCTAAGTTCAAACTCATTGACAGGAATGCTTCCAAACCAAACCTCCCAATTTTTAAGGTTGACGACATTTAAGATATCCAATAACTCATTAGAAGGTTCTCTTCCTCCAGTTTTAGGAACATACCCAGAACTAAAAGAGATGGATCTTAGCTTTAACCTGCTTTCTGGTTTCCTCCTTCCTACTCTTTTCAGCTCAGCCAAATTGACCAAACTTAATCTCTCACACAACAAGATTTCTGGATCAATATCTATTGAGAAAGTTTCAAGTAATCCACTAGTTTATGCTAAAAAATCTGGTTTGGTGTCTCTTGATCTTTCATTCAACAACTTGAGTGGGCGTTTGCCTCCAGAAATAAGTAGTCTTCACAACTTGGCAGGTCTTAATCTATGCAATAACAAATTTGAAGGTACTATTCCTTATGATCTTCCAGATGAACTGAAAGAATTCAATGTAtcctttaataatttttctggTGTTGTGCCTGATAAATTATTGAAGTTTCCTGAATCAGCATTTCGTCCAGGCAACTCCTTGTTAATATTGCCACATTCGCCTGCATCACCAAAAGATGTTGCTGACTTAGGGTTGAGGGAACAAGGGCCACGTATAAAATCTGCAACTAGGATTGCCTTGATTGCAAGTTTGGTTTCTGGTGCATTTGTGATGGCTTTTGTGAGTATTACAATTTATTATAGGGTTCACTGGCAAAAACAAACAACTTCTAAAGAAAATAGAGCAAAAGATGTTGCCCACGAGAGTTCTTCCTCATCTATTAGAGAAGTACCTAATAGAAAAGTAGAAGGAATATCATCATCAAGTTTGtgtccaaatcctaaaccttcatCCCTAGAGGGATCTTTTGATAATGTTATGGTAAAGAAGACAAAAGATTTTGACACTTCTGAGATATTTAAGAATGAGGAAGGAATATCTTCGCCATTATCTTTTTTGTCAGCCTCAGAGCCTTCGTCTTCTAGAAGCCATCCATTTGAGAATCCCAGTGCCTTCAAAGCATGGTCTCCAGATAAATCAGTTGGGGATTTGAATCTATTTGATGGGTCTTTAGAGCTCACTGCAGAAGAATTTTCAAGTGCTACTGCAGAAGTTATTGGTAGGAGCTGTCATGGAACACTGTATAAAGCTACACTTAACTCTGGTCATATATTGGCTGTCAAATTGTTAAAGGAAGGAATAGCTAAAAATAAGGAGTTTGCTAGGGAAGTTAAAAAACTTGGGACTATCAAGCATCCCAGTCTGGTCTCTCTTCAGGGCTACTATTTGGGTCCAAAGGAGAATGACAAATTCATTATATCAAATTATGTTAATGCACAGTCTTTGGACTTTCATCTTCATGAATCAATTTTGTCGTATAGAAGAAATGTTCGTCTGCTGTCTATTGCTGAAAGGCTCACTGTGGCTGTAGCTGTGGCTCAATGTCTGCATTACCTACATAATGAGAAAGCCATACCACATGGCAATCTCAAATCCACAAACATTTTACTTGAAACTGATAATCGAAATGTGCTGCTCACCGATTACAGCCTGCATCGGATACTAACTGCTTCCGGAATTGCCGAGCAAGTTCTAAATGCAGGTGATCTTGGGTATCGGCCTCCTGAGTTTGCTAGCTCAAGCAAACCATGCCCATCCTTGAAGAGTGACGTGTATGCATTCGGGGTTATCTTGTTAGAGCTCCTAACAGGAAGAAATTCAGGGGATATTGTTTCGGGAATCCCCGGCGTTGTTGACCTTGCGGAATGGGTGAGGTTTCTGGCAGAGGAAAATCGTGCCGGTGAGTGCTTTGAGAGGCTGCTTTTGGACAACAAGAATGGATATATACCTCGGATCCCCCAGAGTGAAAGCCAGATTAATTTGAATAATATTATGGGAGGGGCGTCTAGAAAGAGGATGAAACTCAATTTGTTTGTGCTCGCTGCAATGGTCTTGTAA 3030 0.3931 MQTICLMLFLFGVTALGNSDIDALLELKKSIQNDPSGVVLNSWDSRSLASDGCPQNWYGILCTEGNVISIILDNVGLVGDFNFHAINGLKMLRNLSVSNNQFAGSVLHLGPLESLESLDLSLNKFHGFVPSNLLELHNLVHLNLSSNQFEGTLPAGFDNLDRLKYLDLHANSFSGDIMHIFSHIGSVVHVDLSNNRFSGSLDLGLGNNSFLSSIQYLNISHNSLIGQLFAHDGMPYLDNLEVFDASYNQLVGNIPSFTFVVSLRILRLGCNQLSGSLPEGLLKESSTTLSELDLSQNKLEGPIGSITSVTLKKLNISSNKLSGPLPLRVGHCAIIDLSNNLLSGNLSRIQYWGNYVEVIQLSSNSLTGMLPNQTSQFLRLTTFKISNNSLEGSLPPVLGTYPELKEMDLSFNLLSGFLLPTLFSSAKLTKLNLSHNKISGSISIEKVSSNPLVYAKKSGLVSLDLSFNNLSGRLPPEISSLHNLAGLNLCNNKFEGTIPYDLPDELKEFNVSFNNFSGVVPDKLLKFPESAFRPGNSLLILPHSPASPKDVADLGLREQGPRIKSATRIALIASLVSGAFVMAFVSITIYYRVHWQKQTTSKENRAKDVAHESSSSSIREVPNRKVEGISSSSLCPNPKPSSLEGSFDNVMVKKTKDFDTSEIFKNEEGISSPLSFLSASEPSSSRSHPFENPSAFKAWSPDKSVGDLNLFDGSLELTAEEFSSATAEVIGRSCHGTLYKATLNSGHILAVKLLKEGIAKNKEFAREVKKLGTIKHPSLVSLQGYYLGPKENDKFIISNYVNAQSLDFHLHESILSYRRNVRLLSIAERLTVAVAVAQCLHYLHNEKAIPHGNLKSTNILLETDNRNVLLTDYSLHRILTASGIAEQVLNAGDLGYRPPEFASSSKPCPSLKSDVYAFGVILLELLTGRNSGDIVSGIPGVVDLAEWVRFLAEENRAGECFERLLLDNKNGYIPRIPQSESQINLNNIMGGASRKRMKLNLFVLAAMVL 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1536 1009 Pfam Leucine rich repeat N-terminal domain 18 62 IPR013210 -
Sto9g1536 1009 Gene3D Phosphorylase Kinase; domain 1 702 800 - -
Sto9g1536 1009 Gene3D Ribonuclease Inhibitor 202 549 IPR032675 -
Sto9g1536 1009 PANTHER OS07G0626500 PROTEIN 1 999 - -
Sto9g1536 1009 Pfam Leucine Rich repeat 425 440 IPR001611 GO:0005515
Sto9g1536 1009 ProSiteProfiles Leucine-rich repeat profile. 427 448 IPR001611 GO:0005515
Sto9g1536 1009 MobiDBLite consensus disorder prediction 627 646 - -
Sto9g1536 1009 Gene3D Transferase(Phosphotransferase) domain 1 802 989 - -
Sto9g1536 1009 SUPERFAMILY L domain-like 289 525 - -
Sto9g1536 1009 Gene3D Ribonuclease Inhibitor 19 184 IPR032675 -
Sto9g1536 1009 SUPERFAMILY L domain-like 19 302 - -
Sto9g1536 1009 ProSiteProfiles Protein kinase domain profile. 724 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1536 1009 MobiDBLite consensus disorder prediction 601 622 - -
Sto9g1536 1009 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 999 - -
Sto9g1536 1009 MobiDBLite consensus disorder prediction 627 644 - -
Sto9g1536 1009 Pfam Leucine Rich Repeat 138 160 IPR001611 GO:0005515
Sto9g1536 1009 Pfam Protein tyrosine and serine/threonine kinase 728 929 IPR001245 GO:0004672|GO:0006468
Sto9g1536 1009 SUPERFAMILY Protein kinase-like (PK-like) 727 935 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1536 Sto-Chr9 19618392 19629027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1536 92 929 Receptor kinase-like Gene Family AT5G07280 29.867 5.55e-73 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto9g1536 PK_Tyr_Ser-Thr 5.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1536 - - gmx:100809980 1296.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1536 9 19618392 19629027 Sto9g1536 9 19618392 19629027 ECH