Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1493 ATGCCGTCTCGCCAACGTCACCTCTCGCCGCCGTCCACGGTTGTTCCCGACGTATACCCACCcgttcttcctcctcctccttcttcttcagaTCACCACCATCTTCTACCTCCCGTTCTTGCTTCCACCGCCTCtgttttctccttcttcctcttcttcctcctctgttTCCGCAGGCTCGCCACCACCACGAAGCGCACCGCCCCTTCTTCCGATTCCGACGAGTCCAGACCGCCCCACCGGTTCTCCTACTCCCTCCTCCGCCGCGCCACGTCGTCCTTCTCCACCCGCCTCGGCCACGGCGGCTTCGGCCCCGTCTTCTCCGGCGCCCTGCCCCCGCCGTCGCGGCGGCCCATCGCCGTCAAGGTGATGGACTCCGCCTCGTCGCTCCAGGGCGAGCGCGAGTTCCACAACGAGCTCTTCTTCGCGTCGCGGCTCCGGTCCCCGCAGCACGTGGTCTCCGCCATCGGATTCTCCGCCGACCGGAGGCGCCGGAGGTTCCTGCTCGTGTACGAGCTGATGCAAAATGGGAATCTCCAGGACGCGCTCTTGCACCGCAAGTGTCCCGAGCTCTCGGATTGGGAGAAGAGATTCAGCGTGGTTGTTGACATCGCGAGAGCGATCCAGTATCTTCACTCTTGCGATCCCCCCGTGATTCACGGCGATATCAAGCCCAGTAATATCCTTTTGGACCGCCATTTGTCCGCGAGAATTGGGGATTTCGGGCTCGCTAGGTTGAAATCGGAATCGGAATCGCAGCTTGGAGTGggggttttgggagttgaaGAGTTGGAGAGTAATGGCGGTGGGGAATTGGTGGAGGAAACACACAGCGTGGTTACTGATCCCGAGCAATCGCCGGAAGGTTTCGTCGGAATTCCCATATCGGAGACATCGCCGGAGACTATTGAGGCGGCAAAGAAGGCAGCGGCGGCGGCGTCCCCGAATTTCGACATTAAAAATGTGAAAGGAATGGAGCGTACCTCTGTAATGAGCTCTGTCACCACAGTAGCCGAAGGATTAGTCATCAGGCCGGCTCTGATTAATACTCCGGCCATAATGAAGAGCAATTCCGTGAAGGATTGGTGGTGGAAGCAAGATAATAACGAGgcagcatcatcatcatccccatATGAGAATAAGAAAGTGAAGGATTACGTGATGGAGTGGCTTGGGAAGGAGATAAACAAGGAAAAGCCGAAAAGCGAATACGCCATCGAGAAGacagaggagaagaagaagaagaagagcaagaggCGATTGGAGTGGTGGGCGTCAATGGATGATGAGGAAGACAATAGTAGTAAggttttgaagaagaagaaggagaagagaaggCCAGCTAGGGAATGGTGGAAGGAGGAGTATTGTGAGGAGCttgcaaagaagaagaagaaaaagaagaagaaacaacacAGAAATGGAGTGACCAGTGATAATGAGGATTGGTGggcaagagaggaagaagaagttcCCAAAAGTGGTGAATTATTAAGAGCTCGTCGGAATAGCCATGATTCTACTTTAAGTGGAGAAATTCCCAAAAGTGGTGGTATTAGTAGTACTCCAAGCATGAGAGGGACTGTGTGTTATGTTGCACCAGAGTATGGCTATGGCGAAGATGTATCAGAGAAGTGTGATGTGTATAGCTTTGGGGTTCTATTGCTCGTGATCATCTCCGGGCGACGCCCGCTTCAGGTGACGGCCTCGCCGTTGTCGGAGTTTCATAGAGCGAATCTCTTGTCATGGGCACGCCATTGTGCACGCAATGGGAAGCTGCTTGATCTTGTTGATCCGTCTATTAAGTCACTAGATAAAGAGCAGGCTCTTCTCTGCATCACAATTGCTCTGCTTTGTCTGCTCAAGGCGCCTTCTCGTCGGCCTTCGATGAAGGAAGTTGTGGGGATGCTTAGCGGTGAATTGGAGCCGCCGCCGCAATTACCGGTCGAGTATTCACCATCGCCGCCTTCTCGCTTTCCCTTCAAATCTCAGAGAAAAGGCCGCTTACCTTCACGCCCATCCATCCATCACTTTGTGCAACTTTTGTGA 2049 0.4871 MPSRQRHLSPPSTVVPDVYPPVLPPPPSSSDHHHLLPPVLASTASVFSFFLFFLLCFRRLATTTKRTAPSSDSDESRPPHRFSYSLLRRATSSFSTRLGHGGFGPVFSGALPPPSRRPIAVKVMDSASSLQGEREFHNELFFASRLRSPQHVVSAIGFSADRRRRRFLLVYELMQNGNLQDALLHRKCPELSDWEKRFSVVVDIARAIQYLHSCDPPVIHGDIKPSNILLDRHLSARIGDFGLARLKSESESQLGVGVLGVEELESNGGGELVEETHSVVTDPEQSPEGFVGIPISETSPETIEAAKKAAAAASPNFDIKNVKGMERTSVMSSVTTVAEGLVIRPALINTPAIMKSNSVKDWWWKQDNNEAASSSSPYENKKVKDYVMEWLGKEINKEKPKSEYAIEKTEEKKKKKSKRRLEWWASMDDEEDNSSKVLKKKKEKRRPAREWWKEEYCEELAKKKKKKKKKQHRNGVTSDNEDWWAREEEEVPKSGELLRARRNSHDSTLSGEIPKSGGISSTPSMRGTVCYVAPEYGYGEDVSEKCDVYSFGVLLLVIISGRRPLQVTASPLSEFHRANLLSWARHCARNGKLLDLVDPSIKSLDKEQALLCITIALLCLLKAPSRRPSMKEVVGMLSGELEPPPQLPVEYSPSPPSRFPFKSQRKGRLPSRPSIHHFVQLL 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1493 682 MobiDBLite consensus disorder prediction 14 32 - -
Sto9g1493 682 Gene3D Transferase(Phosphotransferase) domain 1 77 266 - -
Sto9g1493 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Sto9g1493 682 MobiDBLite consensus disorder prediction 1 32 - -
Sto9g1493 682 SMART serkin_6 92 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1493 682 SUPERFAMILY Protein kinase-like (PK-like) 70 662 IPR011009 -
Sto9g1493 682 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 22 668 - -
Sto9g1493 682 PANTHER OS07G0586332 PROTEIN 22 668 IPR044576 -
Sto9g1493 682 ProSiteProfiles Protein kinase domain profile. 92 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1493 682 Coils Coil 453 473 - -
Sto9g1493 682 Pfam Protein tyrosine and serine/threonine kinase 94 251 IPR001245 GO:0004672|GO:0006468
Sto9g1493 682 Gene3D Transferase(Phosphotransferase) domain 1 499 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1493 Sto-Chr9 19224123 19226654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1493 515 634 Receptor kinase-like Gene Family AT3G58690 34.426 7.37e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Sto9g1493 PK_Tyr_Ser-Thr 6.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1493 - - egr:104424360 637.876