Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1450 ATGGCTCCACTCAACAAGTCTATAATTCAGATTCTGCTTGGAATACTGGTTGTAACTGCAATGTTACCATTTGGTAAGGCAATAAAATTGATTCCTCTGAAAGTCACAGTTCAAATCATCAATAATCTTACTCAGCCTCAAGACTTGACTCTGCACGGCAAAGACAAGCACCATGATCTCGGAGAGCACACCCTCAAAAGTAGAGAAATGTATGAGTTCACATTTAGGCCGAATTTCTTTTACAAAGCAACACTTTATTTCTGTGGTTTTGCGTGGTCATCCGACCCATCACTTCACCGCTTTGACATATACGATGAACGTAGAGACTACTGTGCAAAGTGTAGTTGGAAAATATCAGAAACAAGTGCATGTAATTATGATGTGACCATCCATGAGCGAAGTGCGAGCTCTTCAATGAATAGCTCACATGCGTTTACAATTACCACGGGTGCTTCAGAACTCACCAccgaaaaaaatatcaaataa 486 0.393 MAPLNKSIIQILLGILVVTAMLPFGKAIKLIPLKVTVQIINNLTQPQDLTLHGKDKHHDLGEHTLKSREMYEFTFRPNFFYKATLYFCGFAWSSDPSLHRFDIYDERRDYCAKCSWKISETSACNYDVTIHERSASSSMNSSHAFTITTGASELTTEKNIK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1450 161 PANTHER S-PROTEIN HOMOLOG 18-RELATED 24 129 - -
Sto9g1450 161 PANTHER - 24 129 IPR010264 -
Sto9g1450 161 Pfam Plant self-incompatibility protein S1 36 127 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1450 Sto-Chr9 18777692 18781501 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1450 34 124 Carbohydrate Esterase AT3G16970 40.206 2.24e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1450 - - pvu:PHAVU_004G004200g 97.0561