Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1435 ATGGAACGATTACATCGATGGCTACGCAGAGAACGTTCGACTGCGAAATGTAAAGACGGCAAATCGGCAAGGCACAATGCACCGCGAGTTGGGCTTCAGGTCTCCATTAATGCTCTGCTTCGTGCGTTTCAATCCTTCTCTCCGATCCGGTGTCGGCGGGGTTTTCGATTCTCTCTTGCGATGAAAACGAAGCACCGATTCCGATCACTACCACTTtctctattcttcttcttcttcgtatCGCTGGCATCTCTCTATTTCGCCGCGGAATCCAAGTGTACGAGAGGATGCGATTTGGCTCTAGCCTCCTATTACGTCTGGGTCGGCGTCGACAACATGACGTGGCTCAGCGAGATCATGCAATCGCAACTCCTCCGCAGCTCTCAAGACATCGCGAGCTACAACAAAGGCACCGCGAGCGTGGATTACGTGCGAACCACCTCCAGAGTGAACGTCCCGTTCCCTTGCGATTGCATCGGAGGCGAATTTCTAGGTCACGTGTTCACGTACCCGCTGAAGGAAGGGGATACCTACACGACGGTTGCGAATCAGAGCTACTCCAACCTGACCACCGATTCGTTCTTGCAGAGCTCGAACAGTTATCGGCCCACCAATATTCCCGATTCGGGAACGCTGAATGTCACTGTTAACTGTTCGTGTGGGAACAGTAAGGTTTCGAAGGATTATGGGTTGTTCGTCACGTACCCGCTTAGGGATGATGATTCGTTGGAGTCGATTGCGAATCAATCGGATCTTGATCCGGTGTTGCTGCAGAGGTATAATCCGGGTGTTAATTTCAGCAAAGGGAGTGGTTTGGTTTATATACCGGGGAGAGGTCTAGCAGGTGGGATTGTTGCTGGAATATCTGTTGGAGCAGTAGCTGGGGTTCTTGTTTTGGCTGCTTGTGTTTTTGTTGTATATTACCGAAACAAGAAGTTGGAAGAGGGAAAATTGCTTTCAGAAGAATCAAAAGTGTTTACTCAGCATGGGAAGGaTTCCAACAGTCCTGCTGCTAGTCTTGATACTGGCATCACAGGCATTACTGTGCACAAATCAGTGGAGTTCTCATATGAGGAACTAGCTCAGGCCACAAATAACTTCAGTATGGCTAATAAAATTGGTCAAGGTGGTTTTGGAGCTGTCTACTATGCAGAGCTGAGAGGCGAGAAAGCTGCAGTTAAAAAGATGGAGATGCAAGCATCAAGAGAGTTTCTTGCTGAGTTGAGAGTGTTAACAAATGTTCATCACCTGAATCTGGTACTACATCTTTCAAAGTTCAAGCATTTATACAGTGTTGTCAAAGAGCTAGAAGGTGTTGAAGAGAAGACCCTCTCTACTAAAGAAGAGCTAGAGGGTGCTGAAGAGAAGACCCTCTCTACTAGAGGAGAGTTAGAGAAGAGCTGGAAGcAAGCCAAGATTACCACCTTTTCAAAACTGATTGAGAGGTCCATGAAGACTGTAGCATCCATTCGTAAGGCGAACAAATCTGGTAATAAGAAGAATGAAGGAGTCCCTCTTATGACGGTAGCGACAGTTGAGGAAAAGCAACCGAAGAATACTAATCAACAAGAAGATGGATGTCAGTTTTATCAAGTACCTCCACCTGCTAACTATGACACCAAGGGAGAAACTAGACCACCTTCATGGAGAGGGAGACCGCCTCCACCTTATCCTTGTTCAATGGAAGATGTTTATGCCTTGCTAGAGATTTGGACAAGAGACGGGGCAGGTCCTTTGAGAATTGAAGGTGTGGAGGAAATAGAGGAGGTAAATTTCATTGAAGAGGATGATCATGTTATTGTGGCCAAGGGACTAGTCAAGTCAACAAACTTCAGAGCTTTCTTTGATTTGCTAGAGTTTGATGAAGAAGCCAAGACTCAGGCTGCGCTATCTATTGCAGAAATAGCAAAGAATATGGGTGGAAGTTGTTGTGCTGTAACGACTAACATGAGGAAGATTGCTAAAGCtcatcaatcaacaatcatTTTTAAAGATACAGAACGTGCTAAAAGTGGTGGTAGTCATAATAAACCTTTGTATGTAGAAGCACAGGTGGCGGAACTCAAGATACGTCGAGCAATGATTGATGGAGGGTCTTCTGTCAATATCATTCCATATTCAGTTTTGAAGAAATCCAACTATCTGGAGCATTTAATAGAGAAGTCTTCTACAACTTTGGGGAGTTTTAACGGAGGAGCAATTGAGACTGTAGGGGTTGTAACATTAAGTTTAAGGGTTGGGCCTTTCCTTACGGCCAACAAGTTCCATGTTATTGACTCTAATCCTAGTTATCATGTGCTTCTAGGACGTCCGTGGATCCATGCTCATGATGTTCCTTCTACTTTACACCAATGTGTCAAGTCTAATCATAAGGGTAAAGATATAGAAATTTCAGCTACCCAAGCACCTTTTGATGAAGATGAAACCCACTTCTTTGAAGCATTGTTCTTGGATGATTATGTTGGAAGAGGGATGAGCTTGATGGCTTCCCCAAAAGGTGTAGCtttagagaagaagaaaggaaagatgGAAGATTTGAAGAAAGAAGACATAAAAGTTTCTAAGGATGACATGAAGGCTAGCTCATCGGGGAGTAAGAGAACATCTGTTGAAATCTTCGAAGTAAAAGGACGCCGAATAGAAAAGTCTATTATGAATAATGGACGGCCCAAGTACCGTTGTTTGTGA 2688 0.4371 MERLHRWLRRERSTAKCKDGKSARHNAPRVGLQVSINALLRAFQSFSPIRCRRGFRFSLAMKTKHRFRSLPLSLFFFFFVSLASLYFAAESKCTRGCDLALASYYVWVGVDNMTWLSEIMQSQLLRSSQDIASYNKGTASVDYVRTTSRVNVPFPCDCIGGEFLGHVFTYPLKEGDTYTTVANQSYSNLTTDSFLQSSNSYRPTNIPDSGTLNVTVNCSCGNSKVSKDYGLFVTYPLRDDDSLESIANQSDLDPVLLQRYNPGVNFSKGSGLVYIPGRGLAGGIVAGISVGAVAGVLVLAACVFVVYYRNKKLEEGKLLSEESKVFTQHGKDSNSPAASLDTGITGITVHKSVEFSYEELAQATNNFSMANKIGQGGFGAVYYAELRGEKAAVKKMEMQASREFLAELRVLTNVHHLNLVLHLSKFKHLYSVVKELEGVEEKTLSTKEELEGAEEKTLSTRGELEKSWKQAKITTFSKLIERSMKTVASIRKANKSGNKKNEGVPLMTVATVEEKQPKNTNQQEDGCQFYQVPPPANYDTKGETRPPSWRGRPPPPYPCSMEDVYALLEIWTRDGAGPLRIEGVEEIEEVNFIEEDDHVIVAKGLVKSTNFRAFFDLLEFDEEAKTQAALSIAEIAKNMGGSCCAVTTNMRKIAKAHQSTIIFKDTERAKSGGSHNKPLYVEAQVAELKIRRAMIDGGSSVNIIPYSVLKKSNYLEHLIEKSSTTLGSFNGGAIETVGVVTLSLRVGPFLTANKFHVIDSNPSYHVLLGRPWIHAHDVPSTLHQCVKSNHKGKDIEISATQAPFDEDETHFFEALFLDDYVGRGMSLMASPKGVALEKKKGKMEDLKKEDIKVSKDDMKASSSGSKRTSVEIFEVKGRRIEKSIMNNGRPKYRCL 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1435 895 CDD retropepsin_like 692 774 - -
Sto9g1435 895 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 74 423 IPR044812 GO:0019199|GO:0045087
Sto9g1435 895 Gene3D Acid Proteases 661 789 IPR021109 -
Sto9g1435 895 Pfam Protein tyrosine and serine/threonine kinase 369 425 IPR001245 GO:0004672|GO:0006468
Sto9g1435 895 Gene3D Phosphorylase Kinase; domain 1 348 428 - -
Sto9g1435 895 SUPERFAMILY Protein kinase-like (PK-like) 347 427 IPR011009 -
Sto9g1435 895 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
Sto9g1435 895 MobiDBLite consensus disorder prediction 515 555 - -
Sto9g1435 895 Coils Coil 436 456 - -
Sto9g1435 895 SUPERFAMILY Acid proteases 677 777 IPR021109 -
Sto9g1435 895 PANTHER LYSM RECEPTOR KINASE 1B 74 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1435 Sto-Chr9 18609778 18636067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1435 71 420 Receptor kinase-like Gene Family AT3G21630 49.344 9.89e-106 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Sto9g1435 PK_Tyr_Ser-Thr 3e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1435 - K13429 gmx:100803042 382.489