Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1431 ATGGGTCTACACTCCTTTTGTCAGTATCTTTTTGTGCTTGAATGCACAGTACGCTTGATTGGATATTGTGTTGAGGGTTCTCTTTTCCTTGTCTATGAGTACATTGAGAATGGAAACTTAAGACAACACCTTCGTGATTCAGGGAGAGATCCGATGCCATGGTCTATTCGTGTGCGAATTGCTCTGGATTCAGCCAGAGGACTTGAATACATTCACGAGCATACAGTGCCTGTATATATTCACCGTGACATAAAGTCCGAAAACATATTAATAGACAAAAACTACTGCGGAAAGGTAGCAGATTTTGGATTAACCAAGCTGACTGAAGTGGGAAATTCATCAATTCCCACCAGTAATATTATGGGCACGTTTGGTTACATGCCACCCGAAAATGCATATGGTAGTGTTTCGCCGAAATTAGATGTCTACGCCTTCGGAGTTGTTCTTTATGAACTTATATCAGCTAAAGAAGCCGTGATCAAGGACAGTGAATCGGGTTCTGGAATGAAGGGCCTTGTTTCTTTGTTTGAAAAAGCTTTTGAGCAGCCTGATCCTAAGGAAGATCTTAAAAAACTTATTGATCCAAGGCTTGGAGATGACTACTCAATTGATTCAGTTCATAAGATGGCACAACTGGCTCAAGTGTGTACAGACAGTGATCCACAGCGACGTCCAAGTATGAGATCCATTGTGGTGGCTCTAATGGCACTTTCTTCTACCACTATGGATTGGGATATTGCCTCCTTCCACCAACATCCAACTATTTCAAGTCTCATGTCTGGAAGATAG 789 0.4183 MGLHSFCQYLFVLECTVRLIGYCVEGSLFLVYEYIENGNLRQHLRDSGRDPMPWSIRVRIALDSARGLEYIHEHTVPVYIHRDIKSENILIDKNYCGKVADFGLTKLTEVGNSSIPTSNIMGTFGYMPPENAYGSVSPKLDVYAFGVVLYELISAKEAVIKDSESGSGMKGLVSLFEKAFEQPDPKEDLKKLIDPRLGDDYSIDSVHKMAQLAQVCTDSDPQRRPSMRSIVVALMALSSTTMDWDIASFHQHPTISSLMSGR 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1431 262 PANTHER LYSM RECEPTOR KINASE 1B 16 262 - -
Sto9g1431 262 SMART serkin_6 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1431 262 Gene3D Transferase(Phosphotransferase) domain 1 11 256 - -
Sto9g1431 262 Pfam Protein tyrosine and serine/threonine kinase 16 233 IPR001245 GO:0004672|GO:0006468
Sto9g1431 262 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Sto9g1431 262 PIRSF ILK 16 251 - -
Sto9g1431 262 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 16 262 IPR044812 GO:0019199|GO:0045087
Sto9g1431 262 ProSiteProfiles Protein kinase domain profile. 1 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1431 262 SUPERFAMILY Protein kinase-like (PK-like) 16 245 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1431 Sto-Chr9 18584863 18589345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1431 17 262 Receptor kinase-like Gene Family AT3G21630 67.480 8.54e-116 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sto9g1431 PK_Tyr_Ser-Thr 4.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1431 - K13429 csin:114320591 379.407