Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1426 ATGGCTACATTCGTTTCTGGATTCGTCGTAGGTTTCACGGCTGTTTGGCAATTAGCTCTCGTCACTCTCGTCGTGGTTCCGATGATAGCTGTAATCGGAGGCATTCACACCACCACGTTAGCCAAGCTCTCCGGCAAGAGCCAGGAAGCTCTCTCTCAAGCTGGCAACACTGTGGAACAGACGGTGGCGCAAATTCGAGTGGTGTTGGCATTCCTTGGGGAGAATAGTGCATTACAAGCCTACTCGTCGGCGTTGAAAGTAGCCCAGAAGATTGGGTACAAAACTGGGCTCGCAAAGGGAATGGGATTGGGTGATGGGACCCTTAAAAGGGGCACCCAAAGTGATAGTGATGGTAGGGCAGCCCTTGAATTGTTGGACAAGTGCCCTAAAGTTGGAGGTGTTGGCTTTgaggtgggtggtggtgggggTTCTCTTGGATGCCCTACACAATAA 453 0.4857 MATFVSGFVVGFTAVWQLALVTLVVVPMIAVIGGIHTTTLAKLSGKSQEALSQAGNTVEQTVAQIRVVLAFLGENSALQAYSSALKVAQKIGYKTGLAKGMGLGDGTLKRGTQSDSDGRAALELLDKCPKVGGVGFEVGGGGGSLGCPTQ 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1426 150 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 104 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g1426 150 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 105 IPR039421 -
Sto9g1426 150 Pfam ABC transporter transmembrane region 1 100 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g1426 150 Gene3D ABC transporter type 1, transmembrane domain 1 108 IPR036640 GO:0005524|GO:0016021
Sto9g1426 150 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 1 105 - -
Sto9g1426 150 SUPERFAMILY ABC transporter transmembrane region 2 99 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1426 Sto-Chr9 18549035 18550441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1426 1 104 Calmodulin-binding Proteins AT2G36910 85.577 5.89e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1426 K05658 - gmx:100814667 185.652