Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1415 TTGAAATTCGTTGATTTGAGTCATTCTGTTAACCTAATTCAAACGCCAAATTTTTCTGGGGTTCCAAATCTTGAAAGGCTGGACCTTGAAGGTTGTACAAACCTCTTAGAGATACATCCGTCACTTGGATTGCTTAAGAagttaattatattgaatttgaaAGATTGTGTGAATCTTCGGAGCCTTCCACGCCAGATGGAGACGAGTTCCCTAGAGAAGTTCATTCTTTCTGGCTGCTCAAAATTAAGCAAGCTTCCTGACTTTGGAGAAAATATGGAATGTCTATCTGTCATTGATTTGAGTAAGTGCAGAAGTTTGGGTTTCTTGCCCAGAACCTTAGGTCACTTGACTTGTCTGAAAAGTCTTAAGCTTTCTGGATGCTCAAAATTTTCGAAGCTTCCAAACACTTTGAATGAAATTACAGGTTTAGTATTGCTTGATGTGAGTGGGACTGTTATGGGGGAAGTACCTCCATCCATTGTACATTTGGTAAAGCTTAAAGAGCTATATTTTCGTGGATGCAAGGCATCAACCTCTCGGAAATCATATTCCCCCCTTAGGTGGCTGCAATGGAGGCATCAAGGTCAAATTCCTATGGGATTGGTGCTGCCTCCTTCTATCTCGGGTCTTTCATCGCTTCAGAAATTAGATCTGGGTTACTGCAATCTGCATGATGGATCGTTTCCTAGTGACTTTGGAAGCTTACCGTCATTGGAAATATTGGACCTAAGTGGAAACCATTTTATCAACTTACCTGCTAGCACCATTTCTAATCTTATGCAGCTGAAAGTTCTTTATTTGGACTGTTGCCCAAGGCTGAAGTCTTTGCCTGAACTTAAACAAGTGGACATGAAACCCTGCATATGGATGCTGAGGAGTTTAGTATCTGCATATGGATGCTGGTGCGATCTAAAACCTCCTCAAAATGGGACACAAGCTGAGTTTCACAAGAGAGATTTAGAATGTGAAGGGAGCATAGCATGCCCAAGAGCCGCAGTACTGAAGAGGAATTTCAACAAAGCAGGATGA 1029 0.4111 LKFVDLSHSVNLIQTPNFSGVPNLERLDLEGCTNLLEIHPSLGLLKKLIILNLKDCVNLRSLPRQMETSSLEKFILSGCSKLSKLPDFGENMECLSVIDLSKCRSLGFLPRTLGHLTCLKSLKLSGCSKFSKLPNTLNEITGLVLLDVSGTVMGEVPPSIVHLVKLKELYFRGCKASTSRKSYSPLRWLQWRHQGQIPMGLVLPPSISGLSSLQKLDLGYCNLHDGSFPSDFGSLPSLEILDLSGNHFINLPASTISNLMQLKVLYLDCCPRLKSLPELKQVDMKPCIWMLRSLVSAYGCWCDLKPPQNGTQAEFHKRDLECEGSIACPRAAVLKRNFNKAG 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1415 342 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 84 IPR044974 GO:0006952
Sto9g1415 342 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 83 281 IPR044974 GO:0006952
Sto9g1415 342 SUPERFAMILY L domain-like 1 280 - -
Sto9g1415 342 Gene3D Ribonuclease Inhibitor 140 304 IPR032675 -
Sto9g1415 342 PANTHER - 8 84 - -
Sto9g1415 342 Pfam Leucine Rich repeats (2 copies) 212 251 IPR025875 -
Sto9g1415 342 Gene3D Ribonuclease Inhibitor 1 139 IPR032675 -
Sto9g1415 342 PANTHER - 83 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1415 Sto-Chr9 18446343 18451423 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1415 45 268 WRKY Transcription Factor Family AT4G12020 29.778 7.70e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1415 - - gmx:100798387 259.61