Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1402 ATGAACAACAATCTGGCATCTCTTGCGAGAACAATAGTGACAAAATTTCGTAGCCCATCTTCTCCATGGCGATTCTATTGTTCACCATCTTCAGTGTCTACTCCTTCTTCCAGCAATAAACTCTTTGTTGGAGGGTTGTCATGGTCAGTGGATGAGAAGTCCCTCAAAGATGCTTTCTCTTCGTTTGGTGATGTAACTGAAGTGAGGATAGTGTATGATAAAGACAGCGGTAGGTCTAGAGGGTTTGGATTTGTCATATTTTCAAACGAAGATAATGCAATATGTGCAAAAGATGCAATGGATGGAAAGGCACTGTTAGGTAGACCATTGAGAATAAGTTTTGCACTCGAGAAGGCCCGTGGTGGACCCGTTGTAGTTCCTCGGATTTCAGATATCGGATATAGAAACAGGCACAGAACATAA 423 0.4208 MNNNLASLARTIVTKFRSPSSPWRFYCSPSSVSTPSSSNKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRSRGFGFVIFSNEDNAICAKDAMDGKALLGRPLRISFALEKARGGPVVVPRISDIGYRNRHRT 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1402 140 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL 4 133 - -
Sto9g1402 140 Gene3D - 17 121 IPR012677 -
Sto9g1402 140 SMART rrm1_1 40 113 IPR000504 GO:0003723
Sto9g1402 140 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 117 IPR000504 GO:0003723
Sto9g1402 140 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 111 IPR000504 GO:0003723
Sto9g1402 140 SUPERFAMILY RNA-binding domain, RBD 34 129 IPR035979 GO:0003676
Sto9g1402 140 PANTHER TRANSFORMER-2-RELATED 4 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1402 Sto-Chr9 18310080 18312228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1402 37 93 C2H2 Transcription Factor Family AT2G19380 40.351 4.70e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1402 - - lang:109361234 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1402 9 18310080 18312228 Sto9g1402 9 18310080 18312228 ECH