Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1334 ATGCAAAGACAAGCAGATCTTCGAACGTTGTGGGGTTGGGTGACCACCTCGCACACTGATCGACCTACACAAGCAGATCTTCGAAACGGACGTCTCTCACCTTCCTCGCAAGTCCTGACGGAGCTGAGGAGAATAACGACACCCACCTCGCGAGTCCTCACTGACGGAGCTGACGAGAACAACCACACCCACCTCGTGATGAAGGACAGCTGCTCGAGGAgagTAAAAGATAAAGAAAGTGGTCGGCATATGCTTTATTCTATATCTTGTGATCAGTGGTTTTCTTCTACCTTTGCTGTAAGTCCGTCAATCATACATCCATATTGCTTCAGGTCTTCTCTCGCACACCAACGGAAAGCCACAAGGCATGAAACAGAGTTTATTGAAAATATTACTGAAGCAGTATGGTCAAAATTACAATCCAAATTGCCACCTGACTTTGATTTTGTGGTCGGAATTGAATCAAGGATAGAGGGAACAAAAGAGATTCAATGGATAGGTCTAAAATTACTTGAACCACATGAAGCATACTGGGATAGAGAATCCTTCTCAAGCATAAGTAACCTAAGATTACTTATCATATCATGTGATTTGAACCTTCGTCGTGGTTTCAAATCATTTCCTCCAGCATTAAAAGTTCTTCAATGGGACAAATATAATTTGGATGCTCTACCACATGGAATTCCACTGGATAAACTTGTTCACTTCAGAATGCAACATAGCAAGATAAAACAATTGTGTAAAGAAACACAGTTTATGGGAAATCTTAAGTTCTTGGATTTAAGCCACTGCATTGACTTAACTAAATTGCCAAATTTTGATGGTATTCCAAATCTTGAAAGATTAGTTCTCAAAGGTTGTAAAAGCCTTgttgaaattcatcagtcaCTTGGTCTACACAAGAAGCTCATGATTGTAAATTTGAAACATTGCACAAGTCTAAAAGCCCTTCCTAGGAAACTTGAAATGAACTCTCTTGTAACCTTTGTACTTTCAGGCTGCTCAAAAATTAGAAAGCTTCCTGAATTTGGAGAAACTATGGAACGTCTATCTACACTTGATTTAGAGGAGACTTCTATCATTAGACTACCTGAATCTCTTGCTTTCTTGACAGGCTTGACTACTCTAAATTTAAGGAATTGCAAAAATCTGGTATGCCTTCCCAATGTGATTCAGAATTTAAGATCCATCAAAATTATCAATCTCTCTGGCTGCTCAAAATGTGAGAAGTTGTCAGAAAATTGGAATGAAAACAAGGCTATGGAAGAGCTCGATGTGAGTGGAACTGCTATAAAAGAAGTACCTTCATCCATCTTTCTTttggaaaatttgaaatttctatCATTCCGTGGGTGCAAAGGGACAACACCACGCCAAGCGTGGAATTTTCCTATTCCCTTTGGGTGGAAGCATAAGCTGAACAATCCTTCAGTTTCAACGATGCTGACGTTGCCGTCTTCCTCACCAAGTCTACCTTTGTTGAAGAAATTAGATTTGAGTTATTGCAATCTCACAGATGAATCACTCCCCAAAGATCTTAGCAATTTATCATCATTGGAAATTTTACTCTTAAGGGGAAACAATTTTGTTAACCTACCTGCTACATTCATTTCCAATCTTTTCAGGCTGGAATTTCTAAGCTTGAAAGGTTGTCAAAGGCTTCAGTCATTGCCTAAACTTCCACCAAATATAGATGTTATAAGGGCAAATGATTGTGCTTCAATGAAAACTTTATTAGACACGCAACTATTGGGTCTCATCGCATCACTAAATTCACAGACAAATTCAAATCAAGGTTACTTTTTTTTGATGATTCAAGGGAGTGAAATCCCATCATGGTTTCACAATGAAAATGACATATATGTGACATGTCCTAAGGAGGAGACCAGTCTATCATTCATAGCAGACATCCCTGATTATTGTTGTTCAAGTGAATGGTGGGGAATTGTTGTATGCTTAGTGGTACATGAGGACATTACATCCCCACCTTCTAGAGGTAGAGGGAGAGCCATCTTCTTTAAATGCTACCCTATTGAAGATGAATCGCCACCAAGTGATTGGCCTGGTCATGAACTTGATGAACAATATAATAGCTCCCATCgacttttgattttttttattccctGTTATTATAATTTCCATGTCAAGAAACTCCAATTGGAATTTCATATTGAAACCCAGTCACAACTCCGACCTAAATATACAGTAACAAAGTATAGTTGGCGTGTGTTATGCAAAGAGGATATTGAAGCCTGGCTGCAAACAAAGTGTGATGGTAGTAGCAGCAACAGAAGAAGCAAAAACATCATTGATATTGCTTCTAACCACTTGGATTGTCTCAATGAGATAAGAGTAGCAACAGAGGCTGCCCAGAAGTTCCAACAATGCCATGAAATCGATGTGAAAGATGCAGCTACCATTGATGCCAAGCAAAACGAGGAAAACTCCAAACATTAG 2457 0.3834 MQRQADLRTLWGWVTTSHTDRPTQADLRNGRLSPSSQVLTELRRITTPTSRVLTDGADENNHTHLVMKDSCSRRVKDKESGRHMLYSISCDQWFSSTFAVSPSIIHPYCFRSSLAHQRKATRHETEFIENITEAVWSKLQSKLPPDFDFVVGIESRIEGTKEIQWIGLKLLEPHEAYWDRESFSSISNLRLLIISCDLNLRRGFKSFPPALKVLQWDKYNLDALPHGIPLDKLVHFRMQHSKIKQLCKETQFMGNLKFLDLSHCIDLTKLPNFDGIPNLERLVLKGCKSLVEIHQSLGLHKKLMIVNLKHCTSLKALPRKLEMNSLVTFVLSGCSKIRKLPEFGETMERLSTLDLEETSIIRLPESLAFLTGLTTLNLRNCKNLVCLPNVIQNLRSIKIINLSGCSKCEKLSENWNENKAMEELDVSGTAIKEVPSSIFLLENLKFLSFRGCKGTTPRQAWNFPIPFGWKHKLNNPSVSTMLTLPSSSPSLPLLKKLDLSYCNLTDESLPKDLSNLSSLEILLLRGNNFVNLPATFISNLFRLEFLSLKGCQRLQSLPKLPPNIDVIRANDCASMKTLLDTQLLGLIASLNSQTNSNQGYFFLMIQGSEIPSWFHNENDIYVTCPKEETSLSFIADIPDYCCSSEWWGIVVCLVVHEDITSPPSRGRGRAIFFKCYPIEDESPPSDWPGHELDEQYNSSHRLLIFFIPCYYNFHVKKLQLEFHIETQSQLRPKYTVTKYSWRVLCKEDIEAWLQTKCDGSSSNRRSKNIIDIASNHLDCLNEIRVATEAAQKFQQCHEIDVKDAATIDAKQNEENSKH 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1334 818 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 183 578 IPR044974 GO:0006952
Sto9g1334 818 PANTHER - 183 578 - -
Sto9g1334 818 Gene3D Ribonuclease Inhibitor 179 345 IPR032675 -
Sto9g1334 818 Gene3D Ribonuclease Inhibitor 346 598 IPR032675 -
Sto9g1334 818 SUPERFAMILY L domain-like 176 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1334 Sto-Chr9 17560118 17567015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1334 159 494 WRKY Transcription Factor Family AT4G12020 31.339 1.13e-33 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1334 - - var:108321227 418.698