Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1316 TTGAATATTGTCACCTCGGATAAGTCAGAGGTAACCGTCCAAGAATGGGCGGATTTGAACGAGTTTTCTGAAGGACTTTGGGAGTATGACAGGGTGTCTGAAGCAAGGCATGAAACAGAGTTTATTGAAAATATAACTGAAGCAGTATGGTCAAAATTACAATCCAAATTGCCACATGACTTTGATTTTTTAGTCGGAATTGATTCAAGGATAGAGGGAACAAAAGAAATTCAATGGATTGTTCTAAATTCACTTGAACCACATGAAGCATATTGGGATAGAGAAGCCTTCTCAAACATAAGTAACCTTAGATTACTTATCATATTTGGTGATTTGAAACTTTGTAGTGGTTTCAAATCCTTTCCTCAAGCATTAAAAGTTCTTAAATGGGACAAATATAATTTGGATGCTCTGCCACATGGAGTTCAACTATATGAACTTGTTGACTTCAAAATGCGACATAGCAAGATAAAACAACTATGGAAAGAAACACAGTTTATGGGAAATCTTAAGTTCATGGATTTAAGCCACTGCATTGACTTGACTAAATTACCAAATTTTGATGGTATTCCAAATCTTGAAAGAGTAGTTCTCGAAGGTTGTAAAAGCCTTGTTGAAATTCATCACTCTCTTGGCCAACACAAGAAGCTCATGATTGTAAATTTGAAGGATTGCAAAAGTCTAAAAGCCCTTCCTAGGAAGCTTGAAATGAACTCTCTTGAAACCTTTATACTCTCGGGCTGCTCAAATATTAGAAGGCTTCCTGAATTTGGAGAAACTATGGAATGTCTATCTACACTTGATTTAGAGGGGACTTCTATCGTTAGATTACCTGAATCTCTTGCTTACGTGACGGGCTTGACTACTTTAAATTTAAGGAATTGCAAAAATCTGGTATGCCTTCCCAATGTGATTCAGAATTTAAGATCCATCAAAATTATCAATCTCTCTGGCTGCTCAAAATGTGAAAAGTTGTCAGAAAATTGGAATGAAAACGGGGCTATGGAAGAGCTCGATGTGAGTGGAACTGCTATAAAAGAAGTACCTTCATCCATCTTTCTTTTGGAAAATTTGAAGTTTTTATCTTTCAATGGGTGCAAGGGGACAGCACCACGCCAGGCTTGGCACCTTCCTCTTCCCTTTGGGTGGAAGCATAAGCTTAACAACCCTTCAAATACAACAGGGTTGATGTTGCCCTCTTTCTCGCCAAGTCTACCTTTGTTGACGAAATTAGATTTAAGTTATTGCAATCTGAGAGATGAATCACTCCCCAAAGATCTTAACAGTTTATCATCATTGGAAGTTTTAGACTTAAGGGGAAACAATTTTGTTAACCTACCTTCTACATTCATTTCTAATCTTTTGAAGCTAGAAGAACTAGGGTTGGAATATTGCTCAAGGCTTCAATTATTGCCTGAACTTCCcccaaatataagaaaaatttgGGCAGATGATTGTGCATCAATTGATCAACCTTCATTAGACACACAATTATGGTGTCTCTTCGCATCACCAATGCTACAGTGTCTCAAACAACAACAAAGAGGTGAAATTGTGTTACTTATTCTTTCAGGGAGTGAAATCCCATCATGGTTTCAAAaccaaaattatttatattcgaGTTCAACAAATATATCATTCACCGTAGACATCCCAGACTTTTGTCGTTTAAGTGAATTTTGGGGAATTGCTGTGTGCTTAATTTTTCATGGAAACATGGGCATAGCGTATGCACCTAATCTCCATCATCATGGTATTGATTTTAAATGCTTCGATACTGAAGGTACATGGAAAGGCCAATCGGGAACATATCTCATTTATGATCAATATAATAGCACCCATCAACTTTCAGTGTTTTTCATTCCTTGTAATAATGTTAAGATCAAGCGTCTTCAATTGGAATTTTCCATTAGTgaacaacaaaataaatataaaatcaaaaagTATGGGTGGTGTCTAGTATGCATGGAAGACTTTGAAGCCTGGCACCAAATAGATTGTGATGGAAGTAGCAGCAATAGCAGAAACAACATCATTGAGGTTGCTTCCAGCAACATCAATGAGGGCATTGGTGATGGGGAGGGGTGTAAAAGTATCAGGGTAGCTCATGGGGTGAAGGAGAACGAGCAGGGAAACAAGGCTACATTTAGACGAACCCTCAGAGAAGATGGGGGAAGGAGGAGGGTTCAGTGGGTGTTAGAAAGACAAACTACAGAGGAGGCCCCAAAGAAATGCGTGGCTGCTAGGCCACTTACTACAGTTGCGCGAGTACCCACGCAGGTTAAACAGGATGGAAGGTTATTGTGCTGGGTACCACGAGCTCAGAGCCAGGTTCAACAAGGTTCTAGTGTCCAAGGAACTGATGTTATGAAACGGGATGTTGGTGTCCAAACTGAGGAGGATGAGATTGTGGTATTAGGAGATGTAAGAGGCACTGAACTAGCAGGGATGGGTGAGACGGCAACTAAggtgagagagagtgtgcctaGAGGTGCACCTTACAAAGGGAAAGCGAAAAAGCAAGCTCACAAAAATACTAATGTTACTCTTAGGGACCCGAGTAGTTTTGGTGTGATAAAAGGTTTGGAACCAAAGACGGATTCTTCATCATCGGAGGCGGAAGAGGGTGAGTTCCTTGATGAGGcttcaataatttcttttttcgacAATGAAGAGGGTCTCCTAATTGAGCAACTGGAGAAGGAAtatgaagaacaagagagggatCAGAAGAGGAGGCTTGATGATGGCCTTGAAGGGGTGGCCTCCCTCTTGGAAATGGGTGAAGGTGATATTATGGCCCCTTTTTTCACATGGCAAGCAATGATGTTCCCAGTAACAATAATATCATCAACAGACTATAAGAATGGTTATGAGATTACCAGATTACCTCTTGAAAAACAGATTGCCGGCGGATCTCCTCCCGACGCCACCATCTCCGCTCTCCATTCCCTCCCTCCTTCCCTCCACGTCACCTTCCTCTCGCCAATCCCCAAACACCATCTTCCCCATGATTCTCCCCCCGCCATTCAGATCCAATTCGTTGTTTCTCGCTCCGTTCCGTCCCTACAAAACACCCTCGAAACGCTGCGTTTCacctcctcttcttcctcccctcctcctcctccttctccttctcctcctccatCTCCTTCTCCGATTGTTGCTTTAATCACAGATCCATTCGTGAATGAAGCCCTGGAAATTGCGAAGAAATTGGACCTTTTGTCGTTCGTGTACTTCCCTCCGTCCGCCATGACGCTGGCTCTGTTCTTGAATCTGCCGAGGCTGGACCGAGAGATCGCATGA 3309 0.3941 LNIVTSDKSEVTVQEWADLNEFSEGLWEYDRVSEARHETEFIENITEAVWSKLQSKLPHDFDFLVGIDSRIEGTKEIQWIVLNSLEPHEAYWDREAFSNISNLRLLIIFGDLKLCSGFKSFPQALKVLKWDKYNLDALPHGVQLYELVDFKMRHSKIKQLWKETQFMGNLKFMDLSHCIDLTKLPNFDGIPNLERVVLEGCKSLVEIHHSLGQHKKLMIVNLKDCKSLKALPRKLEMNSLETFILSGCSNIRRLPEFGETMECLSTLDLEGTSIVRLPESLAYVTGLTTLNLRNCKNLVCLPNVIQNLRSIKIINLSGCSKCEKLSENWNENGAMEELDVSGTAIKEVPSSIFLLENLKFLSFNGCKGTAPRQAWHLPLPFGWKHKLNNPSNTTGLMLPSFSPSLPLLTKLDLSYCNLRDESLPKDLNSLSSLEVLDLRGNNFVNLPSTFISNLLKLEELGLEYCSRLQLLPELPPNIRKIWADDCASIDQPSLDTQLWCLFASPMLQCLKQQQRGEIVLLILSGSEIPSWFQNQNYLYSSSTNISFTVDIPDFCRLSEFWGIAVCLIFHGNMGIAYAPNLHHHGIDFKCFDTEGTWKGQSGTYLIYDQYNSTHQLSVFFIPCNNVKIKRLQLEFSISEQQNKYKIKKYGWCLVCMEDFEAWHQIDCDGSSSNSRNNIIEVASSNINEGIGDGEGCKSIRVAHGVKENEQGNKATFRRTLREDGGRRRVQWVLERQTTEEAPKKCVAARPLTTVARVPTQVKQDGRLLCWVPRAQSQVQQGSSVQGTDVMKRDVGVQTEEDEIVVLGDVRGTELAGMGETATKVRESVPRGAPYKGKAKKQAHKNTNVTLRDPSSFGVIKGLEPKTDSSSSEAEEGEFLDEASIISFFDNEEGLLIEQLEKEYEEQERDQKRRLDDGLEGVASLLEMGEGDIMAPFFTWQAMMFPVTIISSTDYKNGYEITRLPLEKQIAGGSPPDATISALHSLPPSLHVTFLSPIPKHHLPHDSPPAIQIQFVVSRSVPSLQNTLETLRFTSSSSSPPPPPSPSPPPSPSPIVALITDPFVNEALEIAKKLDLLSFVYFPPSAMTLALFLNLPRLDREIA 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1316 1102 MobiDBLite consensus disorder prediction 1031 1053 - -
Sto9g1316 1102 Coils Coil 889 916 - -
Sto9g1316 1102 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 93 510 IPR044974 GO:0006952
Sto9g1316 1102 MobiDBLite consensus disorder prediction 1036 1053 - -
Sto9g1316 1102 Gene3D Ribonuclease Inhibitor 79 236 IPR032675 -
Sto9g1316 1102 PANTHER - 93 510 - -
Sto9g1316 1102 MobiDBLite consensus disorder prediction 853 876 - -
Sto9g1316 1102 SUPERFAMILY L domain-like 90 369 - -
Sto9g1316 1102 SUPERFAMILY L domain-like 394 631 - -
Sto9g1316 1102 Gene3D Ribonuclease Inhibitor 385 562 IPR032675 -
Sto9g1316 1102 Gene3D Ribonuclease Inhibitor 237 378 IPR032675 -
Sto9g1316 1102 Gene3D Glycogen Phosphorylase B; 941 1102 - -
Sto9g1316 1102 Pfam Leucine Rich Repeat 147 165 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1316 Sto-Chr9 17440908 17457223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1316 73 408 WRKY Transcription Factor Family AT4G12020 31.624 1.26e-34 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1316 - - var:108321227 441.425