Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1310 atgaAGTCTTCGAAAGAAGGCAAAATCAATATTCAATCAAGTGAAGAAATATCGGGTAGTTTGACTGCACTGCTAAAAGTCAGAGATAGTGATGATGAGTCTAGCAAAGATGTAAAACCTCAAAGTAGCTCCAACAACACTGAAAAGTCAGATAATCCTAGTGCTAAAGGGTCTGGCTCACATGTGTGTTATAGACCAGAAAAATGGATGCTCCCTCAGCAAGCTGAAGATTCATTGACTCAGCTGAATCTTGCTGTTGTTGGTCATGTTGATTCTGGGAAGTCAACACTCTCAGGTAGACTACTACACCTGTTGGGACGAATTACCCAGAAAGATATGCACAAATATGAAAAGGAGGCCAAGTTGCAGGGTAAGGGATCCTTTGCTTATGCTTGGGCACTGGATGAAAGTTctgaagaaagggaaaggggaaTAACTATGACTGTGGCTGTTGCTTATTTTGACACTAAGAAATATCATGTTGTTGTGCTTGACTCCCCTGGCCATAAAGATTTTGTACCAAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATCCTTGTTATTGATGCCTCAATTGGTTCATTTGAAGCAGGCATGGATGGTAGCAAAGGACAAACAAGGGAGCATGCTCAGCTTATCAGAAGTTTTGGTGTTGACCAGGTTATAATTGCAATAAATAAGATGGATGCTGTGGCATACTCCAAAGATCGATTTGATTTAATTAGACAGCAATTGGGAGTGTTTCTCCGCACTTGTGGGTTCAAAGATTCTTCTGTGTCATGGATTCCCTTGAGTGTcatagaaaatcaaaatttggtGGCATCCCCTTCTGATGTTCGTTTCAAATCCTGGTATAATGGACCTTGTCTGTTAGATGCAATTGATTCGCTTCAACCTCCTACCAGAGAATTCTCAAAACCTCTGCTGATGCCAATATGTGATGTCATCAAGTCACCTACACTTGGACAAGTGTCTGCTTGTGGTAAATTAGAAGCTGGAGCTCTTCGGAGTGGCTCAAAGGTCTTAGTTATGCCGTCAGCTGTGGTGGGGACAGTACGTTCATTGGAGCGCGATTCTAATGCCTGCTCTATTGCAAGAGCTGGTGATAATGTAGCTGTCACGTTGAATGGTGTAGATGGAAGTCATGTAATGGCAGGAGGTGTATTGTGCCATCCTGATTTTCCTGTTGAGGTGGCAAAACGGTTGGAGTTAAAGGTTCTTGTGTTGGAGGGAGCAAATCCCATATTGTTAGGCTCGCAGTTAGAGTTTCATATACACCATGCGAAGGAGCCAGCCAAAGTTTCAAGACTAGTGTCAGTTCTTGATCCGAAGACTGGGAAGGTGACAAAGAAGTCTCCTCGCTGTCTCATTGCAAAACAGAGTGCAGTGATTGAGGTAAGTTTGCAGGAGCCAGTCTGTGTGGTAGAATTCTCCAGCTGTAAAGCTCTTGCAAGGGTGTCTCTAAGAACTTTAGGAAGAACAATTGCTGTTGGACTTGTGACGCGAATAATTGAAGAGCAAGATTAG 1533 0.4194 MKSSKEGKINIQSSEEISGSLTALLKVRDSDDESSKDVKPQSSSNNTEKSDNPSAKGSGSHVCYRPEKWMLPQQAEDSLTQLNLAVVGHVDSGKSTLSGRLLHLLGRITQKDMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASIGSFEAGMDGSKGQTREHAQLIRSFGVDQVIIAINKMDAVAYSKDRFDLIRQQLGVFLRTCGFKDSSVSWIPLSVIENQNLVASPSDVRFKSWYNGPCLLDAIDSLQPPTREFSKPLLMPICDVIKSPTLGQVSACGKLEAGALRSGSKVLVMPSAVVGTVRSLERDSNACSIARAGDNVAVTLNGVDGSHVMAGGVLCHPDFPVEVAKRLELKVLVLEGANPILLGSQLEFHIHHAKEPAKVSRLVSVLDPKTGKVTKKSPRCLIAKQSAVIEVSLQEPVCVVEFSSCKALARVSLRTLGRTIAVGLVTRIIEEQD 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1310 510 MobiDBLite consensus disorder prediction 39 57 - -
Sto9g1310 510 CDD HBS1_C_III 397 505 - -
Sto9g1310 510 Pfam Elongation factor Tu C-terminal domain 398 505 IPR004160 -
Sto9g1310 510 SUPERFAMILY Translation proteins 301 396 IPR009000 -
Sto9g1310 510 CDD EF1_alpha 83 302 - -
Sto9g1310 510 PANTHER OS04G0595300 PROTEIN 28 508 - -
Sto9g1310 510 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 79 310 IPR000795 GO:0003924|GO:0005525
Sto9g1310 510 Gene3D - 70 303 IPR027417 -
Sto9g1310 510 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 402 506 IPR009001 -
Sto9g1310 510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 324 IPR027417 -
Sto9g1310 510 PANTHER TRANSLATION FACTOR 28 508 - -
Sto9g1310 510 Gene3D Translation factors 400 510 - -
Sto9g1310 510 MobiDBLite consensus disorder prediction 22 61 - -
Sto9g1310 510 Gene3D Translation factors 307 396 - -
Sto9g1310 510 Pfam Elongation factor Tu GTP binding domain 82 298 IPR000795 GO:0003924|GO:0005525
Sto9g1310 510 PRINTS GTP-binding elongation factor signature 83 96 IPR000795 GO:0003924|GO:0005525
Sto9g1310 510 PRINTS GTP-binding elongation factor signature 142 150 IPR000795 GO:0003924|GO:0005525
Sto9g1310 510 PRINTS GTP-binding elongation factor signature 162 172 IPR000795 GO:0003924|GO:0005525
Sto9g1310 510 PRINTS GTP-binding elongation factor signature 178 189 IPR000795 GO:0003924|GO:0005525
Sto9g1310 510 PRINTS GTP-binding elongation factor signature 223 232 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1310 Sto-Chr9 17399837 17403924 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1310 5 508 Eukaryotic Initiation Factors Gene Family AT5G10630 68.254 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1310 K14416 - gmx:100801724 847.81