Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1306 ATGGGAAATCTTAAGTTCATGGATTTAAGCCACTGCATTGACTTGACTAAATTACCAAATTTTGATGGAATTCCATATCTTGAAAGATTAGTTCTTGAAGGTTGTAAAAGCCTTgttgaaattcatcagtcaCTTGGTCAACTCAAGAAGCTCGTGATTGTAAATTTGAAGCATTGCACAAGTCTAAAAGCCATTCCTAGGAAGCTTGAAATGAACTCTCTTGAAACCTTCATACTCTCGGGCTGCTCAAAAATTAGAAGACTTCCTGAATTTGGAGAAACTATGGAAAGTCTATCCACACTTGATTTAGAGGGGACTTCTATCGTAAGATTGCCTGAATCTCTTGCTTACTTGACAGGGTTGACTATGTTAAATTTAAGGAATTGCAAAAATCTGGTATGCCTTCCCAACGTGATTCAGAATTTAAGATCCATCAAAATTATCAATCTCTCTGGCTGCTCAAAATGTGAGAAGTTGTCAGAAAATTGGAATGAAAACAAGGCTATGGAAGTGCTCGATGTCAGCGGAACTGCTATAAAAGAAGTACCCTCATCCATCTTTCTTttggaaaatttaaattttctatcTTTCCGTGGGTGCAAGGGGACATCACCACGCCAGGCTTGGAATTTTCCTATTCCCTTTGGTTGGAAGCATAAGCTGAACAATCCTTCAATTTCAACGATGTTGATGTTGCCGTCTTCTTCACCAAGTCTACCTTTGTTGAAGAGATTGGATTTGAGTTATTGCAATCTCAGAGATGAATCACTCCCCAAAGATCTTAACAATTTATCATCACTGGAGGTTTTAGACTTGAGGGGAAACAATTTTGTTAACCTACCTACTACATTCATTTCTAATCTTTTGAGGCTAACAACAGTCCGTTTAGAATATTGCTCAAGGCTTCAAAAATTGCCTGAACTTCCCCAGAATATAAGTTCCATTTGGGCAGATGATTGCGCATCAATGGAACCTTTATTAGACACACAACTATTGGGGCTCTTCGCGTCACCAATGTTACAGCGTCTCAAGCAACAAAACTGTGGTTGCATTGTATCAATACCATGGAGTGAAATCCCATCATGGTTCCAAAACCAAAATTGTTTACATTTGAGTACAACACATATATCATTCACCGCAGATATCCCTGATCATTGTCGTTCAAGTGAATTTTGGGGAATTGTTGCGTGCTTAATTTTTCATGGAGACATGGGCATTACATCTACACCTAATCTTGATGATAGTATTGATTATAAATACTATGGTACTGAAGATACATGGAAAGGTGGATCGGGAGGATTTCAAATTTATGATCAATACAATTGCGGCCATCAACTTTCAATGTTTTTCTTCCCCTGTAATAATGTTCACATCAAGCAACTTCAATTGGAGTTTTCCATTAaacgaaaagaaaaatataaaataacaaagtATGGGTGGCGTGTAGTAAGCATGGAAGACTTCGAAGCCTGGCGCCAAATGAAGTGTGAAGGAAGTAGCGGCAATAACAGAAACCACAACATCATTGAGATTGCTTCCAACAACAACAATGAGTTGACCTTGGGAGTTGGGACTCTCAAAAGagtgtatttttattttgagagGAGTACTAGTGAATTTATTGAAGGATGTGATTTTCTTGAGTGGGCAAAGGTTTTGGACATGCTCACCGCTGCTGTTGCCGCCGCCACCGTCGCCGTTGTCGCCGCCACCGTCGCCGTTGTCGCCGCCACCGTCGCCGTTGTCGCCGCCACCGTCGGAGAAGCCATTGCCGAGAAAAGGCAAGCTTTTTGCTATGAAGGCAAAGATTATGAAAAAGCTGAAAAACATCACTACTAG 1839 0.3883 MGNLKFMDLSHCIDLTKLPNFDGIPYLERLVLEGCKSLVEIHQSLGQLKKLVIVNLKHCTSLKAIPRKLEMNSLETFILSGCSKIRRLPEFGETMESLSTLDLEGTSIVRLPESLAYLTGLTMLNLRNCKNLVCLPNVIQNLRSIKIINLSGCSKCEKLSENWNENKAMEVLDVSGTAIKEVPSSIFLLENLNFLSFRGCKGTSPRQAWNFPIPFGWKHKLNNPSISTMLMLPSSSPSLPLLKRLDLSYCNLRDESLPKDLNNLSSLEVLDLRGNNFVNLPTTFISNLLRLTTVRLEYCSRLQKLPELPQNISSIWADDCASMEPLLDTQLLGLFASPMLQRLKQQNCGCIVSIPWSEIPSWFQNQNCLHLSTTHISFTADIPDHCRSSEFWGIVACLIFHGDMGITSTPNLDDSIDYKYYGTEDTWKGGSGGFQIYDQYNCGHQLSMFFFPCNNVHIKQLQLEFSIKRKEKYKITKYGWRVVSMEDFEAWRQMKCEGSSGNNRNHNIIEIASNNNNELTLGVGTLKRVYFYFERSTSEFIEGCDFLEWAKVLDMLTAAVAAATVAVVAATVAVVAATVAVVAATVGEAIAEKRQAFCYEGKDYEKAEKHHY 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1306 612 SUPERFAMILY L domain-like 3 204 - -
Sto9g1306 612 SUPERFAMILY RNI-like 170 378 - -
Sto9g1306 612 SMART LRR_typ_2 95 118 IPR003591 -
Sto9g1306 612 SMART LRR_typ_2 264 287 IPR003591 -
Sto9g1306 612 SMART LRR_typ_2 239 263 IPR003591 -
Sto9g1306 612 SMART LRR_typ_2 167 189 IPR003591 -
Sto9g1306 612 Gene3D Ribonuclease Inhibitor 217 396 IPR032675 -
Sto9g1306 612 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 351 IPR044974 GO:0006952
Sto9g1306 612 PANTHER - 10 351 - -
Sto9g1306 612 Gene3D Ribonuclease Inhibitor 1 70 IPR032675 -
Sto9g1306 612 Gene3D Ribonuclease Inhibitor 71 213 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1306 Sto-Chr9 17358214 17364200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1306 4 242 WRKY Transcription Factor Family AT4G12020 37.238 1.17e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1306 - - var:108321227 336.65