Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1302 ATGGAGGGCCAATCCAGGGAAGAGTACATTGGATCATTAAGGAGCTACCCAAAAGAAGCTGCCACGGCTTATGATATGGCGGCTATAGAATACCGCGGCCTCAACGCCGTCACAAATTTCGACCTCAGCCGTTACATTAAACTTGCATCTCATCACGAATGGCAGGGGAATGCGACGGAAAACGCAGCAATGGAGGAGGATGAAGACGGTGAAGCACAGAGACTCAACAGCGGTTATGGCAAAAATCTTACAAATGAACGATGTTGTGAACGGAGAGGGGATGGAAGCAAAACAAACTTGGCGGCGAGGACGGATCGCTGCAACGCGAATTGA 333 0.4985 MEGQSREEYIGSLRSYPKEAATAYDMAAIEYRGLNAVTNFDLSRYIKLASHHEWQGNATENAAMEEDEDGEAQRLNSGYGKNLTNERCCERRGDGSKTNLAARTDRCNAN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1302 110 Gene3D AP2/ERF domain 2 43 IPR036955 GO:0003700|GO:0006355
Sto9g1302 110 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 18 77 - -
Sto9g1302 110 MobiDBLite consensus disorder prediction 90 110 - -
Sto9g1302 110 SUPERFAMILY DNA-binding domain 16 43 IPR016177 GO:0003677
Sto9g1302 110 MobiDBLite consensus disorder prediction 58 78 - -
Sto9g1302 110 PANTHER AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR 18 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1302 Sto-Chr9 17340667 17342529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1302 6 45 AP2-EREBP Transcription Factor Family AT1G72570 60.000 1.51e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1302 K09285 - tcc:18595497 68.9366