Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1261 ATGTTCCGAAGATATAAGCGAAGTAAGGGAACTACGAGTTTCCACCACCATGCTATCTACCCTTTTATCTTCCTCCAAGATGAAACCCTCCCTCGAGAGGCAGATGCCCGCCTCTCGGCCGCGACGGGGCGCTCCTCGACCACTTCGGAAGAACCTAAAATAGGAGCAAAAGAAATTTTACCAAGAGATTGGAATGCTGATGAAGAGATGTTGCTACTAGAGGGCATTGGGATGTATGGATTTGGGAATTGGACTGAGGTAGCAGAATGTGTTGGTACAAAAAGCAAATCTCAATGTATTGACCACTATAATGCTGTCTATATGAATTCACCATGCTTTCCTCTCCCTGATTTGTCTCATGTTATGGGAAAGAGCAAAGAAGAGCTCCTTGCTATAGCCAAGGGGTATGGTGAAGTCAACAATGAACTTCCTCAAACTGCAGAGCTTACATTGAAAGAAGAGCCTCCCTTCTCTACAAGATCAAAATCTGAGGAATCTCAAAAGGAAGAACCCATTGATAAAAAATTGTCGAGCTTAACATCAGAGGCTGGTATCAATGCAGTTTGTGGCAAAGCATACTCAAGTGCGGTTAAGAAGACTTCCAACACAAATCAGATCAATGACAGGCTTAAAATGGAAGAATCTCTGGCAGATCGAAGCCTTGGGGAGAAAAAACCCAAATTATTTGGGGAAGATGGGCCTTCTATGATGGAGTTGAATGGATACAATTTTAGGAGAGGGGAATTTGAGATTGAATATGACAATGATGCAGAACAAGTTTTGGCAGATATGGAATTTAAAGACAATGATAGTAAAGCTGAACGTGAAATGAAACTACAAGTGCTTCGTATTTACGCTAAAagGTTAGACGAGCGAAAGCGAAGGAAGAATTTTATCCTTGAAAGAAATTTGCTTTATCCTGATCCTTTTGAGAAATCTCTCTCACCTGAAGAGCTAAAAATATGTCACCGCTACAAGGTCTTCATGAGGTTTCACTCAAAAGAAGAGCATCAAGAGCTGCTCAAAAGTATTATTGAAGAACATCGTATTGTCAAAAGAATACAAGATCTACAGGAAGCTCGAGCTGCTGGCTGTCGCACAGCTGCTGAAGCATACAGATTTATTGATCTCAAGAAGACAAAGGAATCTGAACCAAGTGTCTGTAAAGAAATTGGCAAGGATTCACCTGTTGAATTACAGGCTATCTTAAGGTCCCTAGATGTTTGGGATATCACTGGATTTGCGGGGGCTGAGTTACTGTCACAATCTGAGAAAGAACTCTGTAATGAGATCCGAATTCTACCATCCCACTATCTCAACATGTTGAAGATCATGTCATTAGAGATTTCAAAGGGTAGTTTGACCAAGAAATCTGATGCCTACGATCTCTTCAAAGTAGAACCAAGCAAGGTTGATAGAGTTTATGACATGCTTGTGGAAAAAAGGGGATTGCTGAAGCGTGATGCTATGGATCCTCTCTAA 1482 0.4123 MFRRYKRSKGTTSFHHHAIYPFIFLQDETLPREADARLSAATGRSSTTSEEPKIGAKEILPRDWNADEEMLLLEGIGMYGFGNWTEVAECVGTKSKSQCIDHYNAVYMNSPCFPLPDLSHVMGKSKEELLAIAKGYGEVNNELPQTAELTLKEEPPFSTRSKSEESQKEEPIDKKLSSLTSEAGINAVCGKAYSSAVKKTSNTNQINDRLKMEESLADRSLGEKKPKLFGEDGPSMMELNGYNFRRGEFEIEYDNDAEQVLADMEFKDNDSKAEREMKLQVLRIYAKRLDERKRRKNFILERNLLYPDPFEKSLSPEELKICHRYKVFMRFHSKEEHQELLKSIIEEHRIVKRIQDLQEARAAGCRTAAEAYRFIDLKKTKESEPSVCKEIGKDSPVELQAILRSLDVWDITGFAGAELLSQSEKELCNEIRILPSHYLNMLKIMSLEISKGSLTKKSDAYDLFKVEPSKVDRVYDMLVEKRGLLKRDAMDPL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1261 493 SUPERFAMILY Homeodomain-like 399 483 IPR009057 -
Sto9g1261 493 CDD SANT 64 104 IPR001005 -
Sto9g1261 493 SMART sant 60 109 IPR001005 -
Sto9g1261 493 ProSiteProfiles SANT domain profile. 59 111 IPR017884 -
Sto9g1261 493 MobiDBLite consensus disorder prediction 155 176 - -
Sto9g1261 493 SUPERFAMILY Homeodomain-like 60 110 IPR009057 -
Sto9g1261 493 MobiDBLite consensus disorder prediction 151 177 - -
Sto9g1261 493 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 111 IPR017930 -
Sto9g1261 493 Gene3D - 408 481 IPR036388 -
Sto9g1261 493 ProSiteProfiles Myb-like domain profile. 64 107 IPR001005 -
Sto9g1261 493 Pfam Myb-like DNA-binding domain 63 104 IPR001005 -
Sto9g1261 493 Gene3D - 55 109 - -
Sto9g1261 493 PIRSF Txn_adaptor_ADA2 55 403 IPR016827 GO:0003713|GO:0006357|GO:0035065
Sto9g1261 493 PIRSF Txn_adaptor_ADA2 387 487 IPR016827 GO:0003713|GO:0006357|GO:0035065
Sto9g1261 493 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 61 481 - -
Sto9g1261 493 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 61 481 IPR034318 GO:0003713|GO:0006357|GO:0035065
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1261 Sto-Chr9 16707451 16725009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1261 59 481 EF-hand Containing Proteins AT3G07740 54.525 1.23e-158 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto9g1261 Myb_DNA-binding 7.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1261 K11314 - gmx:100779424 604.749