Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto9g1174 | atggcttCCTTCAACAAATTTATACTTCAAATTCTGCTTGCAATAATAATGTTGGCAATTGCAATGCTATCAAATGGTAAGGCACAACTTATCCCTCCCAAAGTAACCGTTCAAATCATCAATGATCTTCCTCAGCCTCAAGACTTGACTTTGCATTGCAAAGACAAGCACCATGATCTTGGAGAGCACACACTCAAAGTTGGAGAAATGTTTCACTTCAGATTTAGGCCAAATATGTTTGAGAAATTCACACTGTATTTTTGCAGTTTTGTGTGGCCATCCAGCCCTTCACTTCACCGCTTTGATATCTACGATCAAGAAAGAGACTCATGCAAATTGTGTACTTGGAAAATAAGGGAAAAAGGAGCATGTACTTATGATGAGGGAGGAGAGGAAGACGAGAGTGTTATAGTTGACGCCGGAAAAAGTTCGACGGTGGTTCTGGTCTTGAGGAAATTGGCCATGGTCTCCGGTGTCGGAAGGTTGTCGCCGAGAGTGCCGTAG | 504 | 0.4187 | MASFNKFILQILLAIIMLAIAMLSNGKAQLIPPKVTVQIINDLPQPQDLTLHCKDKHHDLGEHTLKVGEMFHFRFRPNMFEKFTLYFCSFVWPSSPSLHRFDIYDQERDSCKLCTWKIREKGACTYDEGGEEDESVIVDAGKSSTVVLVLRKLAMVSGVGRLSPRVP | 167 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto9g1174 | 167 | PANTHER | S-PROTEIN HOMOLOG 18-RELATED | 12 | 130 | - | - | |
| Sto9g1174 | 167 | Pfam | Plant self-incompatibility protein S1 | 36 | 133 | IPR010264 | - | |
| Sto9g1174 | 167 | PANTHER | - | 12 | 130 | IPR010264 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto9g1174 | Sto-Chr9 | 15453704 | 15454650 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto9g1174 | 17 | 128 | Carbohydrate Esterase | AT3G16970 | 38.583 | 7.03e-23 | 87.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto9g1174 | - | - | cam:101497766 | 106.301 |