Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0912 ATGAAATTAAGGACCTGGTCTGAGGAGATACTCTCATCATTTTTCTTTCGACATGCAAACAATGTTAGTCCAGTTGAGCAGCTTGGCTCTTTGGTGCCTGGTACCATTGATATGAAATTTGATGGTGGATACGTAGTTACTGTGGATCTGGGTTCTGAACAGCTAAAAGGCATCCTTTATCATGTTCCTCTCAATGTATCCCAGAGTTCTTATACTGCATCAACAACTACTTCACAAAATCGGAAGAGATCAAGGTTGGGTTTACGTGATCCATCTCGGCCCAAGTCAAACAGGAGTGGCTACAATTTCTTCTTTGCTGAGAACTATGCCAGGTTAAAGCCTTCATACTTTGGGCAAGAGAGAGCAATTAGTAAGAAGATTGGGTTTTTGTGGAACCATCTCACAGAAGCAGAAAGACAGATTTATCAGGAGAAAGGGCGTAGAGACAAGGAGAGATACAAGACTCAAATGTTGGAGTACAAATCATCTAATAATTCAACTCCACAGTAG 510 0.4118 MKLRTWSEEILSSFFFRHANNVSPVEQLGSLVPGTIDMKFDGGYVVTVDLGSEQLKGILYHVPLNVSQSSYTASTTTSQNRKRSRLGLRDPSRPKSNRSGYNFFFAENYARLKPSYFGQERAISKKIGFLWNHLTEAERQIYQEKGRRDKERYKTQMLEYKSSNNSTPQ 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0912 169 MobiDBLite consensus disorder prediction 71 95 - -
Sto9g0912 169 SMART hmgende2 93 162 IPR009071 -
Sto9g0912 169 CDD HMGB-UBF_HMG-box 94 157 - -
Sto9g0912 169 Gene3D High mobility group box domain 75 169 IPR036910 -
Sto9g0912 169 PANTHER HIGH MOBILITY GROUP B PROTEIN 10-RELATED 22 167 - -
Sto9g0912 169 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 22 167 - -
Sto9g0912 169 Pfam HMG (high mobility group) box 94 161 IPR009071 -
Sto9g0912 169 SUPERFAMILY HMG-box 91 163 IPR036910 -
Sto9g0912 169 MobiDBLite consensus disorder prediction 146 169 - -
Sto9g0912 169 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 94 161 IPR009071 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0912 27 166 ARID Transcription Factor Family AT3G13350 56.463 2.61e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Sto9g0912 HMG_box 6.8e-10 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0912 - - adu:107491521 223.787