Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0906 TTGTCTGAAGATTTGAACGTCTCCTCTGGATCATCGGTCGGAAGGTCCAGATTAGAGATCCTTCTTGTGGTTCTTGTAGGTTGGAAGATTGAATTTTGGTACCAAACCGTAAACTCAATCTTTCGTCATTCCAGCTTTACTAGCCATTACAATTTACAGATTTTTCCTATTGCAATGGACCCCGATATAGCCCATTGGATACTGGAGTATGTACTTTGGAGTTCTCTTACAAATTCGGACGCCAAGAAAATCTCTGATGTTTTGCCCATTTCTGGCATGGACTCACGGCTGAGGAAAACTATGCTTCTCAGGGTTGATGGCATTGCAATCACGGAGACAATGAAGCAGGCTTATTGTGCTGTTGCTGTGGAGTGCACTATTAGGTACCTCGACGCATCACCTgacgacaacaacaacaaccaagGTTTCTATTCAGAGGCAGTCGAGAGAATCAGGAGGAGTCGGATTAGGCAGATGGAGGTAGCGACAGCCTCCGGCGAAGGTAGTGATTTGTGGACGGCTGAGCTGAGAGAATGGAGGGATGAGATAGAGGCTGCGGCTTGGGACTCAAAAGTGTATAAGAAGTTAGTGCACATAAATTCCAGACAAATCGCACTCAGGAAGGTTAGGGGTTATCTGGCAGAAACCTGGAAATTCATGGGGCCATCTTTTCTAGAGTTGGCAGCTACACTTTTTGAAGTGAAAGGTTCTAGTAGTTTAAGCAAGGTTGAAGGTGAATTGGATGCCATTGACTCTCCTGGAGCACCAAAGAGTGTAATATGTCAAAATAGCAAGTTGCTGCTCAGAAATAAGCATTCTACATCCTCGTCGCAACAAGGGGGAGTTAAATTCTTTTGTGATGAAAAAGTGGGACCAATACAAGCACTTGTCAACGACCCTCTTCCTGATGTATTGTTGAAGTCTGACATTTTAAGATCCGAATTGGCTGAGAAAAGCATTAGTCATGAGCCACCTCTTGAAAACCTGAAGAGAAATGTTGATGTACCAgaaccaaataataatactgCCCATACTTATGAGCAGGGTGATTCAAAAATTAACTCGCTGGATGGAACACTCAAGAAAAGGAGGAAAGGCAAAAGATGGAGTTCATTGGAAGAGCAGAAATTACATGATGGTGTAAATAAGTTTGGCAAGGGGAATTGGAAGGAAATCCTTAATTTCAATGATGAGATATTTAAAGAGGCAGGCAGAACTGAAGTTGATTTGAAGGAAATGTGGAGAAACAAGAATCGATAA 1260 0.4151 LSEDLNVSSGSSVGRSRLEILLVVLVGWKIEFWYQTVNSIFRHSSFTSHYNLQIFPIAMDPDIAHWILEYVLWSSLTNSDAKKISDVLPISGMDSRLRKTMLLRVDGIAITETMKQAYCAVAVECTIRYLDASPDDNNNNQGFYSEAVERIRRSRIRQMEVATASGEGSDLWTAELREWRDEIEAAAWDSKVYKKLVHINSRQIALRKVRGYLAETWKFMGPSFLELAATLFEVKGSSSLSKVEGELDAIDSPGAPKSVICQNSKLLLRNKHSTSSSQQGGVKFFCDEKVGPIQALVNDPLPDVLLKSDILRSELAEKSISHEPPLENLKRNVDVPEPNNNTAHTYEQGDSKINSLDGTLKKRRKGKRWSSLEEQKLHDGVNKFGKGNWKEILNFNDEIFKEAGRTEVDLKEMWRNKNR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0906 419 ProSiteProfiles Myb-like domain profile. 361 418 IPR001005 -
Sto9g0906 419 Gene3D - 358 419 - -
Sto9g0906 419 CDD SANT_TRF 367 416 - -
Sto9g0906 419 SUPERFAMILY Homeodomain-like 363 417 IPR009057 -
Sto9g0906 419 MobiDBLite consensus disorder prediction 322 371 - -
Sto9g0906 419 PANTHER MYB TRANSCRIPTION FACTOR 59 416 - -
Sto9g0906 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 361 419 IPR017930 -
Sto9g0906 419 MobiDBLite consensus disorder prediction 334 355 - -
Sto9g0906 419 Pfam Myb-like DNA-binding domain 367 416 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0906 Sto-Chr9 9365132 9367984 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0906 109 416 Single Myb Histone (SMH) Gene Family AT1G15720 28.446 1.59e-19 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto9g0906 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0906 - K11111 vun:114187915 228.794