Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0897 ATGATGCAGCACAACTTTGACAGCATCCGTCATATCAATCCATTCGGCCAGAATTGGACTATCAAGGCACGGGTATTGAGACTGTGGCATCTCCCTCCATACCCAAAAAGTTCAGCTCATGATTCATTGGAAATGGTGTTTGGTGATTGTGAGGGATTCAAAATTGGTGCACACATTAAGAGTGCATTTGCTCTGAAATTTAGCAATATTCTGAAAGAAGGATCAGTTTATATTATGTCACAGTTCAGTTTCGGATCAAACAGCGGTGGTTTCTGTGCTGTCAATCATcgatataaattgaattttcagTTCAGTACAAGGGTTACTGGAATTGAAGACAATGACAACATTCACCGTTACGAATTCGAATTTGTTACTGCACAAAACATTCTCTCCGTAAATTTAGACATACAAGTTTTAGTTGATGTAATTGGACGCGTCATTACAATGTCTCCGGTGCATCAGTCATCAGAAAAGGATGCCAAATCTAAGCGACTGACCATCGACATCGAGGATGAACAATTCAAGGTCGAGTTGATGGTGCTCGACGACTCCGACAAAGCCAACGTCACCGTGTTTGATCGTGATGTATCTAAATTTCTTGGCATTTATGCTCCTGACTTGCGCAAAGAGCACTTCCAGTTCTCAGAAAAATTTGATAAGTTTTTAGGTCGTAGCTTTGTTTTCAAAGTCTCTGTCAGGGGGTCTACATGGAACACCTCCCCTTCTTATACTGTGCAACGCATGACTTTGGAGTCCAGCATAATTGAAAAATTCATTGCAGTTCAGAAGACTAAGGTGATACAATGA 810 0.4012 MMQHNFDSIRHINPFGQNWTIKARVLRLWHLPPYPKSSAHDSLEMVFGDCEGFKIGAHIKSAFALKFSNILKEGSVYIMSQFSFGSNSGGFCAVNHRYKLNFQFSTRVTGIEDNDNIHRYEFEFVTAQNILSVNLDIQVLVDVIGRVITMSPVHQSSEKDAKSKRLTIDIEDEQFKVELMVLDDSDKANVTVFDRDVSKFLGIYAPDLRKEHFQFSEKFDKFLGRSFVFKVSVRGSTWNTSPSYTVQRMTLESSIIEKFIAVQKTKVIQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0897 269 Pfam Domain of unknown function DUF223 44 136 IPR003871 -
Sto9g0897 269 Gene3D - 7 114 IPR012340 -
Sto9g0897 269 Gene3D - 150 258 IPR012340 -
Sto9g0897 269 CDD RPA1_DBD_A_like 20 108 - -
Sto9g0897 269 SUPERFAMILY Nucleic acid-binding proteins 175 250 IPR012340 -
Sto9g0897 269 SUPERFAMILY Nucleic acid-binding proteins 4 117 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0897 Sto-Chr9 9194316 9195531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0897 12 212 Core DNA Replication Machinery Family AT5G08020 24.638 1.20e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0897 - K07466 cqi:110711254 102.064