Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0895 ATGGGCCCCATCTTCGACCTGGTACTTTCGAAGCAACTCGCTCCCCACGAACCTCCCTTCCACGATTCCATGCCGCGCCTCCCGTACCCCAACTTCTACTACGCGCCCTCCATGACGTACTTCGTACACCGCTCCTCAATCATAGTCGACGTATCTACCAGGAGTGAAATCAACGCGCTGCTGATGCTGGCGGCTTACGCCGTAGTCTGCCGCCACGAAGGGCTGCCGTTCCGGTACTCCGGGAGTAGGTACACGTGGGAGCATTTCTACGATATGACAGACGCTTGGAAGATGTGGAAGGTTATGAGCGAAGACTTTGATGTTGAATACGTGGAATATAAAGTGGGGGACGAATTTGATTTAGAAGAGTGGATGAGTAAGAAAGGTGAGGTTTTGGATGAAATAGTAGAGAAAAATGGGCTTTACAAAACGAAATTGGAGGAGATAGCTTGCTATGCAACATTTAAACCAGTGGCAAATTTTACGTTTCAGCATGTGTCTAGTATGAATAAGAGTAAAGAATATGGTGTGAAGGTTCGGGTTGTGAAGTTATGGTTTATGCCACCTTACAATAATAATGGTCCCAATTCTGCACCTAATGATGTTCAAATCCAAATGGTCCTCTGTGATCGTGAGAATAATACGATCGCTGCTACTGTGAAAAGCATTTACCTCAACAAATtcaagagtgttttgaaagacGGTGGGGTTTACGTGCTGTCCAAATTCGCTATTGGTATTAGTGGAGGAAATTTCCGTGTCACAAACAATGTATATAAGATCAACTTTCAGTTTAGTACCCATGTTGTGCCAGACGTAGAAGATTCATCCATACACCGTTTTGGGTTCAATTGGATTCCATTTGATTCTATTACAACAGGGCAAGCACATCAAAGTACCTTAGTTGATGTAATTGGTCATATTACAAATATGTCTGATGTGCATGAATCAGCCAACGGTGACGGTGTCACAAAGAGAATAATAGTTGACCTGGAAGACCGAGAACGTGCAAAGCTGAGTGTGACATTGTGGGATCGATATGTTGACCAAATTGTTGAATTCATGGACATGTCCATAACAAGCATCAGCAATCTCTTCATTGCTGATGATGAATCTGCGAATTGCATTGTCGCGTCTGTTCTTAAAGTAAATACCGATAAAGGTTGGTATTATGATGCATGTAAAAAGTGTTTCAACAAACTTGACACTGATGGAGCAATCTTCTATTGCACCAAATGTGAGACATCTGTTCCCACTCTTGAAGCGCGATTCAAGATTGAGTTGGTTGTTATTGATGACATCGACACTGCAAACATAGTTATTTTTTAG 1329 0.4221 MGPIFDLVLSKQLAPHEPPFHDSMPRLPYPNFYYAPSMTYFVHRSSIIVDVSTRSEINALLMLAAYAVVCRHEGLPFRYSGSRYTWEHFYDMTDAWKMWKVMSEDFDVEYVEYKVGDEFDLEEWMSKKGEVLDEIVEKNGLYKTKLEEIACYATFKPVANFTFQHVSSMNKSKEYGVKVRVVKLWFMPPYNNNGPNSAPNDVQIQMVLCDRENNTIAATVKSIYLNKFKSVLKDGGVYVLSKFAIGISGGNFRVTNNVYKINFQFSTHVVPDVEDSSIHRFGFNWIPFDSITTGQAHQSTLVDVIGHITNMSDVHESANGDGVTKRIIVDLEDRERAKLSVTLWDRYVDQIVEFMDMSITSISNLFIADDESANCIVASVLKVNTDKGWYYDACKKCFNKLDTDGAIFYCTKCETSVPTLEARFKIELVVIDDIDTANIVIF 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0895 442 SUPERFAMILY Nucleic acid-binding proteins 283 362 IPR012340 -
Sto9g0895 442 Gene3D - 7 185 - -
Sto9g0895 442 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE-LIKE 96 177 - -
Sto9g0895 442 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE-LIKE 1 95 - -
Sto9g0895 442 SUPERFAMILY Nucleic acid-binding proteins 175 279 IPR012340 -
Sto9g0895 442 SUPERFAMILY Nucleic acid-binding proteins 364 442 IPR012340 -
Sto9g0895 442 CDD RPA1_DBD_A_like 177 269 - -
Sto9g0895 442 Pfam Domain of unknown function DUF223 206 301 IPR003871 -
Sto9g0895 442 Gene3D - 355 442 IPR012340 -
Sto9g0895 442 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 96 177 - -
Sto9g0895 442 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0895 Sto-Chr9 9144926 9148447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0895 174 386 Core DNA Replication Machinery Family AT2G06510 26.549 3.37e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0895 - - gmx:100812240 215.698