Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0868 TTGGGGGAAAACCAATTCTCCGGAGAGATACCAATCTCTTTAGGCAACCTTAGTCAACTAGTTGAACTAAGCATTCCAAAGAATAACCTTGAAGGAAAAATTTCACCCATCTTTGGAAATTGGAAGTATTTGCTATTCCTAGACCTTTCAGAAAACAAGTTTACAGGAGACATACCCTTTCAGGATTTGAGTGTTTCCCCCTTGTCCAAGTTGTTGAACTTATCTCACAATTCATTTAATGGTTCTTTGCCTTTTGAGGTGGGAGCCCTTAAAAACTTTTGGGACTATGGATACTCTGAAAATTATCTTTCTGGTGAGATTCCTGAGACCATTGGAGAGTGCATAAATCAACCTAGAACTTTCAGTCTTGATCAAAGATTAAATATCCTCTATGATGTTTCTTCTGCACTGCATTATCTTCACTATGAATGCGAGCAACCTATTGTCCATTGTGATTTAAAGCCGAGCAACATCCTTCTTGATGATGATATGGTTGCTCACGTGAGTGGTTTTGGGTTAGCAAGACTTCTCTCAACTTTTAATGGCGTCTCTCAAAAGCAAAGCAGTACAACTAGAATAAAAGGAACTATTAGCTATGCTATGCTCCTCCAGTATGGAATAGGTTTTGAAGTGTCAACACAAGGTGATGTATATTCTTTTGGGATTCTAGTTTTGGAAATGGTAACCGGAAGAAGACCCACGGAAGATATGTTTATAGATGATCATGATCTTCATAGCTATGTGATAACTGCATATCCAAATAACGTTTTGGAGATTGTTGACTTGACTCTGCTACGAATCAAATACAACCAACAACAGCAAAAGAAATCAGCGTTCAGGAGTTGA 846 0.3818 LGENQFSGEIPISLGNLSQLVELSIPKNNLEGKISPIFGNWKYLLFLDLSENKFTGDIPFQDLSVSPLSKLLNLSHNSFNGSLPFEVGALKNFWDYGYSENYLSGEIPETIGECINQPRTFSLDQRLNILYDVSSALHYLHYECEQPIVHCDLKPSNILLDDDMVAHVSGFGLARLLSTFNGVSQKQSSTTRIKGTISYAMLLQYGIGFEVSTQGDVYSFGILVLEMVTGRRPTEDMFIDDHDLHSYVITAYPNNVLEIVDLTLLRIKYNQQQQKKSAFRS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0868 281 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 115 - -
Sto9g0868 281 SUPERFAMILY Protein kinase-like (PK-like) 114 258 IPR011009 -
Sto9g0868 281 ProSiteProfiles Protein kinase domain profile. 1 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0868 281 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 116 269 - -
Sto9g0868 281 Gene3D Ribonuclease Inhibitor 71 112 IPR032675 -
Sto9g0868 281 Pfam Protein kinase domain 112 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0868 281 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Sto9g0868 281 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 116 269 - -
Sto9g0868 281 Gene3D Transferase(Phosphotransferase) domain 1 113 279 - -
Sto9g0868 281 SUPERFAMILY L domain-like 2 113 - -
Sto9g0868 281 SMART serkin_6 60 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0868 281 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 115 - -
Sto9g0868 281 Gene3D Ribonuclease Inhibitor 1 66 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0868 Sto-Chr9 8772689 8774824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0868 108 267 Receptor kinase-like Gene Family AT3G47580 53.416 7.87e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto9g0868 Pkinase 2.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0868 - - ats:109773702 214.927