Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0729 ATGAACAACTCCGTCTCTCGTGGTTCCAACTCCTCCTCCAATGGCCTCCTCACCGTCACCATCGCCAGCCACAATGACGATCCCGCCGTCGTCCCTCCCGGCGCCGtcaacgacgacgacgacgacgactcCGTTGTGGATCCCGATGATCCTTTTGACGTCGCTCAAACCAAGAATGCACCGCCTGAGACCCTTCAGCGATGGAGACAAGCATCACTGGTGCTCAATGCTTCCCGGCGTTTTAGATATACTCTGGACTTGAAAAAGGGAGAGGAGGAAGAGCATCAGAAAGGCTTGATTAGAGCCCATGCCCAAGTCATACGAGCAGCATTGCTTTTCAGATTAGCTGGTGAACGTGACTTAGGGAAAGGTACAGGATTGGCACCCCCAATCCCAGTTAATAACTATGAAGTTCCGCTTGAAGAACTTGTCTCTATGTTCAAGGATCAGAATGTTAAAGGCTTATCAGATTTACTAAAATCAGATCCTCAGAAAGGAATCAGTGGAGATGACGCTGATCTATTGAGAAGGAGAAGTGCATTCGGAACAAATACATATCCTAGGAAAAAGGGGCGGAATTTCTTGATGTTTCTATGGGATGCTTGGCAGGACTTAACCCTTATCATATTGATTATAGCAGCTGTGGTGTCATTGGCACTTGGAATTAAAACAGAGGGCTTGGAAGAAGGATGGTATGATGGGGGAAGTATTGCCTTCGCTGTTATCCTTGTCATTGTTGTGACAGCTGTCAGTGATTATCGGCAATCACTGCAGTTTCAGAATTTGAATTCAGAGAAACAAAATATACAATTGGAGGTCATTAGAGGTGGTAGAACAACAAAGATATCTATATTTGATATTGTTGTTGGTGACGTCGTACCTCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAATTTTAATCGCTGGTCATTCCCTTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCACAAGGATCATAAAGCACCTTTCTTGATGTCTGGTTGCAAAGTAGCTGATGGATTCGGTGTTATGCTGATTACTGGTGTTGGTATCAATACAGAGTGGGGATTGTTGATGGCAAGCATCTCTGAGGATACTGGAGAAGAGACCCCATTACAGGTTCGATTGAATGGAGTTGCAACTTTTATCGGCATTGTGGGTCTTACAGTAGCGGTTGCTGTGCTAGCGATCCTCCTGGGCAGATTCTTTACTGGAAATTCAAGAGATCTAGATGGAAATGTCCTATTTGTTCCTGGAAAGACTTCTATTAGTAGAGTAGTAGATGGAGTCATCGAAATTTTCACCATTGCAGTCACAATTGTGGTTGTTGCAGTTCCTGAAGGTCTTCCTCTGGCTGTTACCTTAACCCTAGCATACTCAATGCGGAAAATGATGGCAGACAAAGCCTTGGTAAGAAGGCTGTCAGCCTGTGAAACTATGGGCTCTGCAACAACAATTTGCAGTGATAAAACAGGAACATTAACCTTAAATCAGATGACTGTGGTTGAGGCATATGTTGGGAGGAATAAATTGAATCCACCAGATGACTCATCAAAGTTGCATCCAGAAGTTTTATCTCTGATAAATGATGGCATCGCACAGAATACTACTGGAAGTGTTTTTGTGCCTAAGGATGGCGGAGAGATAGAGATTTCAGGATCTCCTACAGAAAAGGCAATTCTTTCTTGGGCAGTCAAGTTGGGGATGAATTTTGATCTTATCAGATCCAATTCATCAGTTCTCCATGTTTTTCCCTTCAATTCAGAGAAAAAGCGAGGCGGTGTTTTGCTAAAGCAGTTGGACTCCAGAGTACATATACATTGGAAAGGAGCTGCAGAGATAGTGCTTGGCGCATGCACTCATTTTCTTGATTCCAATGGTTGTTTGCAATCTATTGAAGATGACAAGGACTTTTTCAAAGGGGCTATTGATGAAATGGCCGCTCAAAGTTTGCGGTGTGTGGCCACTGCATACAGATCATATGAATTGGACAAAGTTCCCTCTAATGAGGAGGAATTGGCCAAGTGGTCCTTACCTGAAGATCAGCTTGTTTTGCTTTCTATTGTTGGTATAAAGGATCCCTGTCGCCCTGGCGTTAAAGATGCAGTGCAAGTATGCACTGCAGCTGGTGTAAAGGTGCGCATGGTCACTGGGGACAATCTTCAAACAGCAAAGGCAATAGCTTTGGAGTGTGGAATACTGTCTTCACTTTCTGATGCTGTTGAACCAAATATAATTGAGGGAAAGACATTCCGTGCATTATCTGAAAATGAAAGGGAACAAGTAGCTAAAAAAATAACGGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTCTACTTGTTCAAGCACTGCGTAAAGGGGGTGAAGTTGTTGCTGTCACGGGAGACGGAACCAATGATGCTCCTGCACTTCATGAGgCAGATATTGGTCTTTCTATGGGCATTCAGGGAACTGAAGTTGCGAAAGAAAGCTCAGATATTATAATCCTGGACGATAACTTTGCATCAGTAGTAAAGGTTGTCCGCTGGGGCCGTTCTGTATACGCAAATATTCAGAAATTTATACAGTTCCAGCTCACTGTTAATGTTGCAGCACTTGTGATAAATGTTGTGGCATCAATAACATCTGGTGCTGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCCCTGGCACTGGCTACTGAACCACCAACAGACCACCTTATGCACAGAACACCAGTTGGTCGAAGGGAACCGCTTATAACGAATATCATGTGGAGGAACTTAATTGTACAGGCTGTATATCAAATTGCAGTTCTCCTTGTTCTTAACTTCGTTGGTGAAAGTATACTAAATACTAATGGCTCTAAAGCCTATGCCTTGCAACTGAAGAATACTTTGATTTTCAATGCATTCGTCTTCTGCCAAATATTCAATGAGTTCAATGCTCGGAAACCAGACGAAATGAATGTGTTCAGCGGAGTGACCAAGAACCATCTCTTTATGGGAATTGTGGGACTAACCTGTATATTTCAGATACTCATCATCGAGCTCTTTGGAAAGTTCACTGACACGGTGAGGCTTGATTGGAAGCTGTGGCTCGCGTCAATAATTATTGGTTTCATCAGTTGGCCCCTTGCTATACTTGGAAAACTAATTCCAGTTCCCAAAACACCTCTGGGGCGCTACTGTAAGAGGACATTTAGGCGATTCAAGAAACCTCGTGCCACACAATAG 3258 0.4319 MNNSVSRGSNSSSNGLLTVTIASHNDDPAVVPPGAVNDDDDDDSVVDPDDPFDVAQTKNAPPETLQRWRQASLVLNASRRFRYTLDLKKGEEEEHQKGLIRAHAQVIRAALLFRLAGERDLGKGTGLAPPIPVNNYEVPLEELVSMFKDQNVKGLSDLLKSDPQKGISGDDADLLRRRSAFGTNTYPRKKGRNFLMFLWDAWQDLTLIILIIAAVVSLALGIKTEGLEEGWYDGGSIAFAVILVIVVTAVSDYRQSLQFQNLNSEKQNIQLEVIRGGRTTKISIFDIVVGDVVPLKIGDQVPADGILIAGHSLAIDESSMTGESKIVHKDHKAPFLMSGCKVADGFGVMLITGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVAVLAILLGRFFTGNSRDLDGNVLFVPGKTSISRVVDGVIEIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGRNKLNPPDDSSKLHPEVLSLINDGIAQNTTGSVFVPKDGGEIEISGSPTEKAILSWAVKLGMNFDLIRSNSSVLHVFPFNSEKKRGGVLLKQLDSRVHIHWKGAAEIVLGACTHFLDSNGCLQSIEDDKDFFKGAIDEMAAQSLRCVATAYRSYELDKVPSNEEELAKWSLPEDQLVLLSIVGIKDPCRPGVKDAVQVCTAAGVKVRMVTGDNLQTAKAIALECGILSSLSDAVEPNIIEGKTFRALSENEREQVAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVASITSGAVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLIVQAVYQIAVLLVLNFVGESILNTNGSKAYALQLKNTLIFNAFVFCQIFNEFNARKPDEMNVFSGVTKNHLFMGIVGLTCIFQILIIELFGKFTDTVRLDWKLWLASIIIGFISWPLAILGKLIPVPKTPLGRYCKRTFRRFKKPRATQ 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0729 1085 ProSitePatterns E1-E2 ATPases phosphorylation site. 494 500 IPR018303 -
Sto9g0729 1085 Gene3D - 502 699 IPR023299 GO:0000166
Sto9g0729 1085 PANTHER CALCIUM-TRANSPORTING ATPASE 49 1076 - -
Sto9g0729 1085 MobiDBLite consensus disorder prediction 24 48 - -
Sto9g0729 1085 Gene3D - 200 1050 - -
Sto9g0729 1085 PRINTS P-type cation-transporting ATPase superfamily signature 316 330 - -
Sto9g0729 1085 PRINTS P-type cation-transporting ATPase superfamily signature 492 506 - -
Sto9g0729 1085 PRINTS P-type cation-transporting ATPase superfamily signature 692 703 - -
Sto9g0729 1085 PRINTS P-type cation-transporting ATPase superfamily signature 714 724 - -
Sto9g0729 1085 PRINTS P-type cation-transporting ATPase superfamily signature 799 818 - -
Sto9g0729 1085 PRINTS P-type cation-transporting ATPase superfamily signature 823 835 - -
Sto9g0729 1085 SUPERFAMILY HAD-like 490 904 IPR036412 -
Sto9g0729 1085 SMART Cation_ATPase_N_a_2 146 222 IPR004014 -
Sto9g0729 1085 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 765 887 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto9g0729 1085 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 432 518 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto9g0729 1085 SFLD p-type atpase 474 851 IPR044492 -
Sto9g0729 1085 Pfam Ca2+-ATPase N terminal autoinhibitory domain 49 91 IPR024750 GO:0005516
Sto9g0729 1085 SFLD Haloacid Dehalogenase 474 851 - -
Sto9g0729 1085 Pfam haloacid dehalogenase-like hydrolase 489 813 - -
Sto9g0729 1085 Gene3D - 62 114 - -
Sto9g0729 1085 Gene3D - 173 368 - -
Sto9g0729 1085 PRINTS Sodium/potassium-transporting ATPase signature 235 255 - -
Sto9g0729 1085 PRINTS Sodium/potassium-transporting ATPase signature 485 506 - -
Sto9g0729 1085 PRINTS Sodium/potassium-transporting ATPase signature 611 629 - -
Sto9g0729 1085 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 704 IPR023299 GO:0000166
Sto9g0729 1085 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 148 1062 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Sto9g0729 1085 SUPERFAMILY Calcium ATPase, transduction domain A 270 365 IPR008250 -
Sto9g0729 1085 Gene3D - 489 844 IPR023214 -
Sto9g0729 1085 Pfam Cation transporting ATPase, C-terminus 884 1060 IPR006068 -
Sto9g0729 1085 PANTHER CATION TRANSPORTING ATPASE 49 1076 - -
Sto9g0729 1085 Pfam E1-E2 ATPase 269 470 - -
Sto9g0729 1085 CDD P-type_ATPase_Ca_PMCA-like 174 932 - -
Sto9g0729 1085 Pfam Cation transporter/ATPase, N-terminus 150 217 IPR004014 -
Sto9g0729 1085 SUPERFAMILY Calcium ATPase, transmembrane domain M 150 1062 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0729 Sto-Chr9 7118380 7141349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0729 9 1082 Primary Pumps ATPases AT3G21180 74.262 0.0 1623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0729 K01537 - gmx:100777143 1683.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0729 9 7118380 7141349 Sto9g0729 9 7118380 7141349 ECH