Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0720 ATGGATGGTATTCATGGGAGTGATTCTCGGATACACATAAATGATGCTCAACATCCTATGCATGTGACGTATGGGCAAGAAACTGAACATCATGGATTAGACCATATGAGTGATGGGAATGGGATAGATGAAGATCACAATAATTGTGGAGATACTAGCAACGGTGGACAAGAAACTATAGAAGGAGATGCATCCAACCCTGGAAATCTTAATGACAATCATACTGCAATAATAGAGCAAGGAAACGATGGTGGAGACCAGCTCACATTGTCTTTTCAAGGCCAGGTTTATGTATTTGACTCGGTGTCGCCTGATAAGGTTCAAGCTGTGCTATTACTATTGGGAGGCCGTGAAGTATCCCCCACTATGCCTTCCATCCCGATAACTTCTCACCATAATAATCGGGGAATGTCTGGGGCTCCATTAAAACTCAGTGTTCCACAAAGATTAGCTTCATTGATTAGATTTCGTGAGAAGCGGAAAGAAcggaattttgacaaaaaaattcgTTATACAGTTCGTAAAGAAGTAGCATTAAGGATGCAGAGAAATAAAGGCCAATTTACATCTTCGAAGTCCAACCATGATGAATCTGCATCGGCTGCAACAAATTGGGAGACAAATGAAAACTGGACGTCTGACAATACTGGATCCCAGCAGCAGGATATTGTCTGTAGGCACTGTGGCATCAATGAGAAGAACACGCCAATGATGCGACGTGGACCAGAAGGGCCAAGAACCCTCTGCAATGCATGTGGACTTATGTGGGCAAATAAGGGAACTCTGAAGGACCTAACAAAGGCTCCCTTACCTGGACAAAATCCTTCATTAAACAGGAATGAACTGTGTGCCTGTGTCTCCTCGATTAGCCACAAAGTTCTGCTTAATGGGAGTATTGCTGGTTCTGTCTTAGCTTCTAGAGAGGTGGAGGGAAACAACTGGGTTCTTGCTAAGATAGATAACATCAAAATTTCCCACCTTATTTATGCGTATGATGTGCTCTTATTTGCCCGCTGCGATCCCGAAAGCATCAAAGCTGTTAAGGATGCTCTGGATCGTTTTCTTGCCATTTCAGGTCTTTTTATAAATGAGTCCAAGTCGTCCTGTTGGTTTTCTCCCTCCACTACCGAGAATGTCAAGTCCGATATTGTCAATTTCCTGGGGTTCAAGCCGGTGTCTAACCTTGTACTAGCGATAGAAGGAGAGTTCATTTCATTGGGTGGGATAAAAtttatcaagaaaaaaaatatatggggTCTTAGTTTAACCAAAGCTTTTGAAAGAAATAATGCTTTCCTTGCAAAGCTTCTTTGGCGGGTTCATAGGGAGGAAGGGGTGTGGTCCAGGTTGTGCAAATCTAGACTAAATTTGTCTTCTAACTCCTCCTCTACTGTGGGAAAATCTTTGTCTCGGGGTAGAGCTATTTTTGAAGCAGGTAAATGCAAAGTCATTCACTCGGGTCTAAACACAAAATTTTGGTTAGATTCTTGGGTTAGTCTAGGTCCAATTCGCTCCCTCATTCAGGGTCCTCTGACATTGGAAGACTTGAACTTGACAGTTGCTGAAGCCTTGGGCTTCTCCTCTGATTGGCAAAATCTTTCAATTTCCTTCTCTCTTCCTGATTCTATTCTGAATTACTTGAGGACCTTACAATCAGAAGCCGGCTTCCCGTGTCCTATTATGAACCCAAAATCTAATCCAGTTCATCCAAAGAACTATTAA 1722 0.4164 MDGIHGSDSRIHINDAQHPMHVTYGQETEHHGLDHMSDGNGIDEDHNNCGDTSNGGQETIEGDASNPGNLNDNHTAIIEQGNDGGDQLTLSFQGQVYVFDSVSPDKVQAVLLLLGGREVSPTMPSIPITSHHNNRGMSGAPLKLSVPQRLASLIRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFTSSKSNHDESASAATNWETNENWTSDNTGSQQQDIVCRHCGINEKNTPMMRRGPEGPRTLCNACGLMWANKGTLKDLTKAPLPGQNPSLNRNELCACVSSISHKVLLNGSIAGSVLASREVEGNNWVLAKIDNIKISHLIYAYDVLLFARCDPESIKAVKDALDRFLAISGLFINESKSSCWFSPSTTENVKSDIVNFLGFKPVSNLVLAIEGEFISLGGIKFIKKKNIWGLSLTKAFERNNAFLAKLLWRVHREEGVWSRLCKSRLNLSSNSSSTVGKSLSRGRAIFEAGKCKVIHSGLNTKFWLDSWVSLGPIRSLIQGPLTLEDLNLTVAEALGFSSDWQNLSISFSLPDSILNYLRTLQSEAGFPCPIMNPKSNPVHPKNY 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0720 573 ProSitePatterns GATA-type zinc finger domain. 225 252 IPR000679 GO:0006355|GO:0043565
Sto9g0720 573 MobiDBLite consensus disorder prediction 30 45 - -
Sto9g0720 573 PANTHER GATA TRANSCRIPTION FACTOR 28 4 273 - -
Sto9g0720 573 ProSiteProfiles CCT domain profile. 149 191 IPR010402 GO:0005515
Sto9g0720 573 PANTHER GATA TRANSCRIPTION FACTOR 28 4 273 IPR045280 GO:0006355
Sto9g0720 573 Gene3D - 215 275 IPR013088 GO:0006355|GO:0008270
Sto9g0720 573 MobiDBLite consensus disorder prediction 30 82 - -
Sto9g0720 573 SMART tify_2 81 116 IPR010399 -
Sto9g0720 573 CDD ZnF_GATA 224 279 IPR000679 GO:0006355|GO:0043565
Sto9g0720 573 SMART GATA_3 219 275 IPR000679 GO:0006355|GO:0043565
Sto9g0720 573 Pfam tify domain 86 115 IPR010399 -
Sto9g0720 573 Pfam CCT motif 149 191 IPR010402 GO:0005515
Sto9g0720 573 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 220 268 - -
Sto9g0720 573 MobiDBLite consensus disorder prediction 46 82 - -
Sto9g0720 573 MobiDBLite consensus disorder prediction 187 217 - -
Sto9g0720 573 ProSiteProfiles Tify domain profile. 81 116 IPR010399 -
Sto9g0720 573 Pfam GATA zinc finger 225 261 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0720 Sto-Chr9 7029380 7040117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0720 1 281 Tify Gene Family AT1G51600 61.053 1.34e-119 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Sto9g0720 CCT 2.1e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0720 - - pvu:PHAVU_008G254600g 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0720 9 7029380 7040117 Sto9g0720 9 7029380 7040117 ECH