Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0711 ATGCAATTAGTATCAAATGGTAACAAGGAGGAATGTTCAGAGAGTGAACCCATCTTGAATCAGCATAATTTAGAAGAATCAGGGGAACCTTCATTTTCATGTGAAATTACAGATGCTGGAGGGGAGTTAGATGTTGACAATGATGATTTACACAACATTCAAGTTGACGAGACATGTCATCTGGTGAATGCAGATCAGCCACAATGCCGGATATGCCTTGATAGTGGAGGAGAAGATTTAATTGCTCCGTGCCATTGCAAAGGTACCCAAAAGTATGTCCACAGATCATGTCTTGATAATTGGAGGTCTACTAAGGAGGGATTTGCTTTTTCTCACTGTACAGAATGCAGAGCTGTCTTTATATTACGCGCAAATGTCCCGCATGACCGGTGGTGGTTGAGATTAAAATTTCAGTTCCTTGTTGCCAGGGATCatgcatttatttttataactgtTCAGCTGGTTGTCGCATTCTTGGGGGTGCTTGTGTACAAATTTTATGGAGATGAGCTGAGAGAAATGTTTGGTTATGAAGAACATCCTTATGGGTTCTATACTATGGCCGTTCTTGCCATTGTTTTGGTCGGTTTGCTCTATGGCTTCTTCATAGCCATTATATGTGGTCAAAGAATCAATGAACGTCATTACCATGTTCTTGCGAAACAGGAATTGACAAAGGAATATGTGGTAGAAGATCGAGAACATATAAAGAATGTGCCTGAACTTGACCCGAGCCATGTGACAGAACTGAGAATGTTGGGCCTTTACTAA 771 0.4021 MQLVSNGNKEECSESEPILNQHNLEESGEPSFSCEITDAGGELDVDNDDLHNIQVDETCHLVNADQPQCRICLDSGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPHDRWWLRLKFQFLVARDHAFIFITVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHIKNVPELDPSHVTELRMLGLY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0711 256 CDD RING_CH-C4HC3_MARCH 69 117 - -
Sto9g0711 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 121 IPR013083 -
Sto9g0711 256 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 2 255 - -
Sto9g0711 256 PANTHER OS02G0132300 PROTEIN 2 255 - -
Sto9g0711 256 ProSiteProfiles Zinc finger RING-CH-type profile. 61 123 IPR011016 GO:0008270
Sto9g0711 256 SMART ringv_2 68 117 IPR011016 GO:0008270
Sto9g0711 256 SUPERFAMILY RING/U-box 64 120 - -
Sto9g0711 256 Pfam RING-variant domain 69 116 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0711 Sto-Chr9 6944850 6948227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0711 56 215 C3H Transcription Factor Family AT1G50440 75.625 3.70e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0711 - - gmx:100789593 475.707