LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto9g0647	ATGAAGGAAGCGGAGAAAAAGAAGTATCCTATTGGTCCTGAGCATTATGAGCTCTTGGAGGAGATTGGCCAGGGCGTGAGTGCTTACGTGCACCGCGCTCGTTGTATATCCTTCAATGAGATCGTCGCGATTAAAATCCTTGATTTTGAACGTGACAATTGTGATCTGAATAACGTTTCTCGTGAAGCACAGACCATGATCTTGGTTGACCACCCTAACGTCCTTAAGTCACACTGCTCCTTTGTTAGTGATCATAATCTGTGGGTTGTCATGCCATACATGGCTGGTGGTTCCTGTCTACACATATTGAAAGCTGCCTTCCCCGATGGTTTTGAGGAGGTTGTAATAGCTACAGTATTGCGAGAGGTATTAAAGGGTTTAGAGTACCTTCATCATCATGGGCATATACACAGAGATGTAAAGGCAGGGAACATTCTAATTGATTCACGTGGTGCAATCAAGCTTGGGGATTTTGGTGTATCTGCTTGTCTTTTTGATTCAGGTGACAGGCAACGCACAAGGAATACATTTGTGGGGACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATGATTTCAaAGCTGATATCTGGTCATTTGGTATAACTGCATTGGAGCTTGCCCATGGTCATGCTCCTTTCTCAAAGTATCCACCAATGAAGGTACTGCTAATGACATTGCAAAATGCTCCCCCCGGCCTTGATTACGAAAGGGATAGGAAGTTCTCTAAGTCATTTAAGCAGATGATTGCTAGCTGCTTGGTAAAAGATCCTTCAAAACGGCCCACTGCAAGTAAGTTGCTaaagaattctttctttaagCAAGCACGCTCAAATGATTATATCGGACGGAGACTTTTGGAGGGGCTGCCTGCTTTAGGTGAACGTATGAAAGCCCTAAAGGTTGCATATTATAGACTAGTAATTTTTTCTTCCCTGCTATGA	957	0.4347	MKEAEKKKYPIGPEHYELLEEIGQGVSAYVHRARCISFNEIVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPYMAGGSCLHILKAAFPDGFEEVVIATVLREVLKGLEYLHHHGHIHRDVKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPTASKLLKNSFFKQARSNDYIGRRLLEGLPALGERMKALKVAYYRLVIFSSLL	318

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto9g0647	318	ProSitePatterns	Protein kinases ATP-binding region signature.	22	45	IPR017441	GO:0005524
	Sto9g0647	318	PANTHER	SERINE/THREONINE-PROTEIN KINASE FRAY2	5	305	-	-
	Sto9g0647	318	Pfam	Protein kinase domain	16	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto9g0647	318	Gene3D	Phosphorylase Kinase; domain 1	4	92	-	-
	Sto9g0647	318	SUPERFAMILY	Protein kinase-like (PK-like)	14	286	IPR011009	-
	Sto9g0647	318	PANTHER	SERINE/THREONINE-PROTEIN KINASE FRAY2	5	305	-	-
	Sto9g0647	318	CDD	STKc_OSR1_SPAK	14	277	-	-
	Sto9g0647	318	PIRSF	ILK	1	276	-	-
	Sto9g0647	318	SMART	serkin_6	16	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto9g0647	318	ProSiteProfiles	Protein kinase domain profile.	16	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto9g0647	318	PRINTS	Tyrosine kinase catalytic domain signature	91	104	IPR001245	GO:0004672\|GO:0006468
	Sto9g0647	318	PRINTS	Tyrosine kinase catalytic domain signature	129	147	IPR001245	GO:0004672\|GO:0006468
	Sto9g0647	318	PRINTS	Tyrosine kinase catalytic domain signature	199	221	IPR001245	GO:0004672\|GO:0006468
	Sto9g0647	318	PRINTS	Tyrosine kinase catalytic domain signature	246	268	IPR001245	GO:0004672\|GO:0006468
	Sto9g0647	318	Gene3D	Transferase(Phosphotransferase) domain 1	97	292	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto9g0647	Sto-Chr9	6300244	6302600	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto9g0647	5	305	MAP Kinase Kinase Kinase Kinase	AT1G79640	87.043	0.0	576

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-Fray	Sto9g0647		Pkinase	4.3e-60	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto9g0647	K08835		-	tcc:18596342	581.637