Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0632 ATGGCGAAGATATCTCAGAAAAAGGTGAATTCGAAGAGCTCGGAAAACGCAGCCACCGCACCGTCCAAGACGAAGACGACGAAGCGATCCCGCAAGAGCATACCAAGAGACTCTCCGCCTCAACGGAGCTCCGTCTTTCGCGGCGTCACAAGGCATCGTTGGACGGGACGATACGAAGCTCATCTGTGGGATAAGAATTGCTGGAATGAATCACAGAGCAAGAAAGGAAGACAagGAGcatatgatgatgaagaagctgCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAACACACAATCCTCAATTTTCCtTTATCAAATTATCAAGAAGAGGTCAAGGAGATGGAGGGTCAATCAAAAGAAGAATACATTGGATCCTTAAGAAGAAAAAGCAGTGGGTTCTCTCGGGGAGTCTCAAAATATAGAGGCGTTGCAAGACATCATCACAATGGGAGATGGGAGGCTCGGATTGGAAGAGTCTTCGGCAACAAATATTTGTACCTTGGAACTTACGCAACACAAGAAGAAGCAGCCACAGCATACGATATGGCAGCCATAGAGTACCGAGGACTTAACGCCGTTACAAACTTTGATCTCAGCCGTTACATCAACTGGCTACGTCCAAAAACCCAAGAAGATCATAATAATAGCTCTGAGTCTCAACCAAGCCCTATTAATAATAGTAACAATAACTCGGAGTGTAACTCCGGCGACGACACGATGGCCGATCCATTCGCCGTCGGCGACAGCGGCGGAGGATCGacatcgtcgtcgtcgtcgtcggcACTAGGAATTCTCTTGCAATCATCAAAGTTCAAAGAAATGTTAGATAATTACCCTGCAACTGCATCTACAGAAACAAACCCTCCTCGTCGTTCCTTCCCGGAAGATATTCAAACATTTTTTGATTGTGAAGACTCAGGAAGCTACACAGACACTACTGATCATGACATAATATTTGGTGATTTGAGCTCAATTTCTGCTCCAATTTTTTTACTATGA 1014 0.4349 MAKISQKKVNSKSSENAATAPSKTKTTKRSRKSIPRDSPPQRSSVFRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQGAYDDEEAAARAYDLAALKYWGQHTILNFPLSNYQEEVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYINWLRPKTQEDHNNSSESQPSPINNSNNNSECNSGDDTMADPFAVGDSGGGSTSSSSSSALGILLQSSKFKEMLDNYPATASTETNPPRRSFPEDIQTFFDCEDSGSYTDTTDHDIIFGDLSSISAPIFLL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0632 337 CDD AP2 143 204 IPR001471 GO:0003700|GO:0006355
Sto9g0632 337 SUPERFAMILY DNA-binding domain 143 204 IPR016177 GO:0003677
Sto9g0632 337 ProSiteProfiles AP2/ERF domain profile. 45 108 IPR001471 GO:0003700|GO:0006355
Sto9g0632 337 SUPERFAMILY DNA-binding domain 44 110 IPR016177 GO:0003677
Sto9g0632 337 MobiDBLite consensus disorder prediction 215 242 - -
Sto9g0632 337 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 321 - -
Sto9g0632 337 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Sto9g0632 337 PRINTS Ethylene responsive element binding protein signature 184 204 IPR001471 GO:0003700|GO:0006355
Sto9g0632 337 MobiDBLite consensus disorder prediction 1 24 - -
Sto9g0632 337 Pfam AP2 domain 143 194 IPR001471 GO:0003700|GO:0006355
Sto9g0632 337 Pfam AP2 domain 44 100 IPR001471 GO:0003700|GO:0006355
Sto9g0632 337 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 321 - -
Sto9g0632 337 MobiDBLite consensus disorder prediction 215 263 - -
Sto9g0632 337 ProSiteProfiles AP2/ERF domain profile. 144 202 IPR001471 GO:0003700|GO:0006355
Sto9g0632 337 MobiDBLite consensus disorder prediction 1 49 - -
Sto9g0632 337 Gene3D AP2/ERF domain 45 110 IPR036955 GO:0003700|GO:0006355
Sto9g0632 337 Gene3D AP2/ERF domain 143 204 IPR036955 GO:0003700|GO:0006355
Sto9g0632 337 SMART rav1_2 144 208 IPR001471 GO:0003700|GO:0006355
Sto9g0632 337 SMART rav1_2 45 114 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0632 Sto-Chr9 6209409 6214532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0632 41 206 AP2-EREBP Transcription Factor Family AT5G57390 71.006 2.20e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Sto9g0632 AP2 1.9e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0632 K09285 - rcu:8280276 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0632 9 6209409 6214532 Sto9g0632 9 6209409 6214532 ECH