Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0616 ATGATCATTGCTCTGAGATCCAAAAACAAGCTAGGATTTGTGGATGGATCTTTGAAGCAGCCTACTGATCGATCGTCAGATGCTTATCTTAGCTGGAGCTTTGTGGATTCAGCTGTAACTCAATGGCTTCTCAACTCGATGTGTACCGAATTGTATGAAGCTTATATGTTTACTTCAACAGCTTGTGAGATTTGGAAGGAGTTGGAGGAGAAGTATGGAACCATTTCTCATGGGCTTGGGAAAGCCAATGAGAATGTGAAAAGTTTAGCAGAAGCAGTAAATGTGGTGGTTAGCAATGCTGTTAACTCGAGGTTCGTTGataagaagaaggagaaagctTCAAGATATTGTACTCATTATGCCAGAACTGGACATACAGCTGAGACATACTTTAAGAAGCATGGTTTTGGTTCGAAGAATGTGGAAATGGATAAGAAGGTGATGGCAGAAATAATACAAGAAGAATTAAAGAAGTTGATGAAGGCCAAGGTTACTTCGGATGAGAGTCCTGTTAGTGCAAGTTATTTTGCAGATTTTACAGGTAATCttgcacttaaaacttgtgattaCTTTGATGATAATGACAAAGGAGTTAAATGGATTGTTGATTTCGGGGCTTCTAGTCATGTAACTGGTAATAAAATGTTGTTGTTTAACACTAAAAGCCTAAAGGGAAGAATACAATGCAGTTACCAGATGGACCAATTGACTAAAGAACAATTGGCCCATGGAAGGATAGTGAAGAATCTCTATGTACTGGTTACAGAGAGGAAAGAAGAGGCTGAGAAAAGTTTAGGACATCCTATTCCAAGGGAGGAAGGAGCACAAGCAGTAGCAATAAGAGTAAGATCTTATGAGGAGAACACAGGCTTTGTTTTCATGAATTGTAGCATTGGAGGGAATGGAAGAATATTGTTAGGTCGAGCATGGGGTAATTATTCTCGTGTTATTTTTGCTTTTACAAGTATGTCAAACGTTATTGCTCCTCAAGGTTGGAATGACTTCAATGATCCTTCAAGAGACCGGACTGTATTTTATGGAGAATACAAGTGCATAGGGACAGGAACTGATATGAGTATGAGGCCATCTTATGTGCAAAGACTAAGTGATGCACAAGTTTCTCCTTTTCTTACTGCATCTTATATTGATGGTGACCAATGTTCTACTTGCCTTCTTAGCTTTACTCAACATCGCCAAAGGGCACGAAAGGGACGAGCAGACACAACACGACATCAAACATTCaaacctttcttcttcttcatctttttttattctttcgtTCCATCGCGCACGAATGCTCAGCGTTTCGATAAACCATCGTGCCTGATTGCTAAACGTTTCGACAATCACTCTATTAAGTTCGGTGTTCCAATGCGCTAG 1380 0.3797 MIIALRSKNKLGFVDGSLKQPTDRSSDAYLSWSFVDSAVTQWLLNSMCTELYEAYMFTSTACEIWKELEEKYGTISHGLGKANENVKSLAEAVNVVVSNAVNSRFVDKKKEKASRYCTHYARTGHTAETYFKKHGFGSKNVEMDKKVMAEIIQEELKKLMKAKVTSDESPVSASYFADFTGNLALKTCDYFDDNDKGVKWIVDFGASSHVTGNKMLLFNTKSLKGRIQCSYQMDQLTKEQLAHGRIVKNLYVLVTERKEEAEKSLGHPIPREEGAQAVAIRVRSYEENTGFVFMNCSIGGNGRILLGRAWGNYSRVIFAFTSMSNVIAPQGWNDFNDPSRDRTVFYGEYKCIGTGTDMSMRPSYVQRLSDAQVSPFLTASYIDGDQCSTCLLSFTQHRQRARKGRADTTRHQTFKPFFFFIFFYSFVPSRTNAQRFDKPSCLIAKRFDNHSIKFGVPMR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0616 459 PANTHER PECTINESTERASE 8-RELATED 277 386 - -
Sto9g0616 459 SUPERFAMILY Pectin lyase-like 284 386 IPR011050 -
Sto9g0616 459 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 277 386 - -
Sto9g0616 459 Pfam Pectinesterase 283 385 IPR000070 GO:0030599|GO:0042545
Sto9g0616 459 Gene3D - 267 392 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0616 Sto-Chr9 6027170 6031678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0616 284 386 Carbohydrate Esterase AT1G05310 61.165 2.80e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0616 - - aprc:113862143 163.696