Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0615 TTGCGAATCGAGAAAGTCCAGGACAGAGATGGTGCAGTGACTGCTCAGGTAAGATCTTATGAGGAGAACACAGGCTTTGTTTTCATGAATTGTAGCATTGGAGGGAATGGAAGAATATTGTTAGGTCGAGCATGGGATAATTATTCTCGTGTGATTTTTGCTTTTACAAGTATGTCAAATGTTATAGCTCGTCAAGGTTGGAATGACTTCAATAATCCTTCAAGAGACCGGACTGTATTTTATGGAGAATACAAGTGCATAGGGACAGGGGCTGATATGAGTATGAGGCCATCTTATGTGCAAAGACTAAGTGATGCTCAAGTTTCTCCTTTTCTTATTGCATCTTATATTGATGGTGACCAATGGCGTTTCGGCCACCAGGTGGCCGAAACGCCTGCAAGATTGCCTGCAAAGGTGTTTCGGCCAGGAGGTGGCCGAAACACCCGTGTAGTCCCATCAGGGTGCAGTGAGCACCCTGAccgttga 486 0.4444 LRIEKVQDRDGAVTAQVRSYEENTGFVFMNCSIGGNGRILLGRAWDNYSRVIFAFTSMSNVIARQGWNDFNNPSRDRTVFYGEYKCIGTGADMSMRPSYVQRLSDAQVSPFLIASYIDGDQWRFGHQVAETPARLPAKVFRPGGGRNTRVVPSGCSEHPDR 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0615 161 SUPERFAMILY Pectin lyase-like 11 123 IPR011050 -
Sto9g0615 161 MobiDBLite consensus disorder prediction 142 161 - -
Sto9g0615 161 Gene3D - 2 131 IPR012334 -
Sto9g0615 161 Pfam Pectinesterase 7 120 IPR000070 GO:0030599|GO:0042545
Sto9g0615 161 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 122 - -
Sto9g0615 161 PANTHER PECTINESTERASE 8-RELATED 7 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0615 Sto-Chr9 6018024 6025987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0615 10 122 Carbohydrate Esterase AT1G05310 60.526 2.57e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0615 - - twl:119997842 168.703