Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0590 ATGACTACTCCCTGTGTAACTGTGTTGGAGTTAAATGTCGTGGTTGACTGTGGTGAGGAATTATTGTGGTTGCTCAGACTTCAGGTCTTAACCGAGCTTGCAGTTTGTTTCAACGCTTGTGAAAAAGCACCTGAGTTGGAGATGGGGGTATACCTCAGCACCCCGAAAACAGAGAAGGCCTCTGAAGATGGCGAGAATGACAGGCTTCGCTATGGTTTATCTTCCATGCAGGGATGGCGTACAACCATGGAAGATGCTCATGCAGCCCATACTGATTTAGATGATTCTACATCTTTCTTTGGTGTTTATGATGGCCATGGAGGTAAAGCAGTTGCTAAATTCTGTGCCAAGTATCTACACCAACAGATGCTTAAGCATGAAGCTTATTTAGCTGGAGATATAGGCAcatctttaaaaaaatcttttctcagAATGGATGAGATGATGTGTGGACAAAGAGGCTGGAGAGAATTAGCAGTCCTgggagaaaaaacaaaaaaattttctgGTATGCGAGAGTGGTTTATATGGTCCCCCAAGAGTGGTGCTGTCAGTGGCCACGTTGATGACTGGGCTTTTGAGGAGGATGCTCACTATGTGACAATTCGTCATGAACTTAGAATGATTAAGGGCCCCATTGTGGTTTCAGGGGACCAAATGCCGGATGCACAGCTTGTGTTGCAGTCATCCAAGGCAACCAGCTTGTTGTTGCAAATGCTGGTGATTCTCGTTGTGTTTTATCAAGGAACGGCCAGACTGGACCTTCCAGAGTCCAGTGTGTCTCTGCCATTGTCATCACACTCAATGTCTGTGACTCATCCAGACTTTAAGGCACATATTTTGACTAAAGATCACAAGCCTGACCTCGAGGTTGAGAAAGACAGGATTCTAAAAGCTGGTGGATTTGTTCGATTTGGACGTGTCAATGGAAGTTTAAACTTAGCTAGAGCAATTGgaGACATTGAATTCAAGGAAAACAAGCATTTACCTGCTGAAAAGCAGATTATAACTGCTGATCCAGACATAACTTCTGTTGAGCTTTGCAGTGATGATGAGTTTCTTGTGATAGCATGTGATGGGATATGGGATTGCATGTCAAGTCAACAGCTTGTGGACTTCGTACATGAACAGTTGAAAACTGAGAATAAGCTTAAAGTGATTTGTGAGAGGGTATTTGATTGGTGCTTGGCACCAACAGCTGGTGGTTTGGGATGTGACAATATGACCATGATCTTGATTCAGTTCAAAAGGCCTTCAAATCCAGATGCTTCTGTGATGGACCAGTAA 1287 0.4242 MTTPCVTVLELNVVVDCGEELLWLLRLQVLTELAVCFNACEKAPELEMGVYLSTPKTEKASEDGENDRLRYGLSSMQGWRTTMEDAHAAHTDLDDSTSFFGVYDGHGGKAVAKFCAKYLHQQMLKHEAYLAGDIGTSLKKSFLRMDEMMCGQRGWRELAVLGEKTKKFSGMREWFIWSPKSGAVSGHVDDWAFEEDAHYVTIRHELRMIKGPIVVSGDQMPDAQLVLQSSKATSLLLQMLVILVVFYQGTARLDLPESSVSLPLSSHSMSVTHPDFKAHILTKDHKPDLEVEKDRILKAGGFVRFGRVNGSLNLARAIGDIEFKENKHLPAEKQIITADPDITSVELCSDDEFLVIACDGIWDCMSSQQLVDFVHEQLKTENKLKVICERVFDWCLAPTAGGLGCDNMTMILIQFKRPSNPDASVMDQ 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0590 428 ProSiteProfiles PPM-type phosphatase domain profile. 70 415 IPR001932 -
Sto9g0590 428 PANTHER PROTEIN PHOSPHATASE 2C 45 174 IPR015655 GO:0004722|GO:0006470
Sto9g0590 428 PANTHER PROTEIN PHOSPHATASE 2C 270 421 IPR015655 GO:0004722|GO:0006470
Sto9g0590 428 SMART PP2C_4 60 413 IPR001932 -
Sto9g0590 428 CDD PP2Cc 70 415 IPR001932 -
Sto9g0590 428 Gene3D - 264 427 IPR036457 -
Sto9g0590 428 Pfam Protein phosphatase 2C 70 149 IPR001932 -
Sto9g0590 428 Pfam Protein phosphatase 2C 279 400 IPR001932 -
Sto9g0590 428 Gene3D - 47 186 IPR036457 -
Sto9g0590 428 ProSitePatterns PPM-type phosphatase domain signature. 99 107 IPR000222 GO:0043169
Sto9g0590 428 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 45 174 - -
Sto9g0590 428 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 270 421 - -
Sto9g0590 428 SUPERFAMILY PP2C-like 50 417 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0590 Sto-Chr9 5754202 5761667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0590 48 421 PP2C-type Phosphatase Gene Family AT2G25070 59.733 1.54e-157 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0590 K17499 - gmx:100499713 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0590 9 5754202 5761667 Sto9g0590 9 5754202 5761667 ECH