Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0573 ATGCCTTCTAGAAACTTCCCTCCTCCTAACCCTTCAACTCCAAGTCTCTTCATCAAAACCAGAGTCCTCTTCCTCGCACTCACAATCTCTGCTTCTGTGGTGATTTTCTGTTCAATCCTCTACTTTCTCTACCACTTATGGCATTCTCTTGTAGTGCACAGAGCTAAAACCATCCCCTTTGATTCAACTGCTCCATTGAAGCTCCAGAGGTTCTCATACAAAGAATTGAAGCTAGCCACCAATGGCTTTGACCCCACCAATGTAATAGGCAAAGGGGGTTCTGGAACTGTCTTTAAAGGGACACTCAAAGATGGGAAATTGATTGCTATTAAGCGTTTGGATTCTTTGTCTTTACAAACAGAAAGAGAGTTTCAGAATGAGCTTCAGATTCTTGGTGGGTTGAGATCTCCTTTTCTTGTGACCCTTTTAGGGTATTGTGTGGAGAAGAACAAGAGAGTGTTGGTGTATGATTATATGCCCAACAGAAGCTTGCAAGAATCTCTCtttggaggagaagaagaagatgatggggGTTTGAGTTTGAGCTGGGAGAGGAGGTTCCACATCATTCTAGATGTTTCTAGAGCTTTGGAGTTCTTGCACCTTGGGTGTGATCCTCCAGTGATTCATGGTGATGTCAAGCCAAGCAATGTCCTTCTTGATTCCGAGTTTCGCGGCAAGATTTCGGATTTCGGGTTGTCAAGGATCAAAGTGGACAATGAATTTGGTGTTGATTTGAGTCAAGAGCTATGGAAAAGCCAAGAACTTTCAGGTAATCTGACTGCTGAAACACCTCCTGCTATTGCTTTGAACTTGAACTCTTTGAGTTATAATGCCAATATTGCTGCTAGTGAGAATACTAATGTAAAGGGGAAGGAGATATCAAGTTTAGACATTGGTGGTGGGGAAGATTATTGGCATAGCAAGTTTGTTCCTTATGATGATGAGTTTTCTTCTAGCATTGATCACAAAGAGCACCTAGCTGAACTAAGCAAAAAGAGCAATAAGCTGAAGAATCTCCAAACCAAGTGGAAGAAAAAAGGCTTCAAAGTAGTCCCACATTTTGATCTGGGAAGGAGGTTTTATCTGTGCACTAGGCGGCGTAACAACTTCGCCGAGCAAACTCCGGACGAGTCTGATCAAAACGGAGGAGAGTTCAGTTTCCGGAGAGgttggaagaagaagagtacTCGTTCGATCGGCAGCGACATGTGGAGTGGCGATCTCTTCAGCCGGGAGCTCAGCAGCACGACCAGCATGAGAGGGACGCTGTGTTATGTCGCGCCGGAATATGGCGGGTGTGGTTACTTGATGGAGAAGGCAGACATTTACAGTTTAGGAGTTTTGATCCTTGTGATTGTGTCAGGAAGAAGACCATTACATGTTCTTGCATCTCCCATGAAGCTAGAGAAAGCCAACTTAATAAGCTGGTGTAGGCATTTGGCTCATGCTGGTAACATTTTAGAATTAGTAGATGAGAGATTGAGAGATTATAATAAGGAGCAAGCAAGCTTGTGCATCAATTTAGCACTCATTTGCTTACAGAAAATCCCAGAGTTGAGACCTGACATTGGAGATATTGTTAGGATCTTGAAGGGGGAGATGGATCTCCCACCACTTCCATTTGAGTTTTCACCATCTCCACCTTCCAAGTTTTACAGCAGAACAAGAACAAAACACAAGAGCACTACTCCTAATACTACAGAATAG 1710 0.4222 MPSRNFPPPNPSTPSLFIKTRVLFLALTISASVVIFCSILYFLYHLWHSLVVHRAKTIPFDSTAPLKLQRFSYKELKLATNGFDPTNVIGKGGSGTVFKGTLKDGKLIAIKRLDSLSLQTEREFQNELQILGGLRSPFLVTLLGYCVEKNKRVLVYDYMPNRSLQESLFGGEEEDDGGLSLSWERRFHIILDVSRALEFLHLGCDPPVIHGDVKPSNVLLDSEFRGKISDFGLSRIKVDNEFGVDLSQELWKSQELSGNLTAETPPAIALNLNSLSYNANIAASENTNVKGKEISSLDIGGGEDYWHSKFVPYDDEFSSSIDHKEHLAELSKKSNKLKNLQTKWKKKGFKVVPHFDLGRRFYLCTRRRNNFAEQTPDESDQNGGEFSFRRGWKKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAHAGNILELVDERLRDYNKEQASLCINLALICLQKIPELRPDIGDIVRILKGEMDLPPLPFEFSPSPPSKFYSRTRTKHKSTTPNTTE 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0573 569 PANTHER OS08G0275200 PROTEIN 1 326 - -
Sto9g0573 569 PANTHER OS08G0275200 PROTEIN 324 563 - -
Sto9g0573 569 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Sto9g0573 569 SMART serkin_6 83 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0573 569 Coils Coil 323 343 - -
Sto9g0573 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Sto9g0573 569 Gene3D Transferase(Phosphotransferase) domain 1 159 265 - -
Sto9g0573 569 Gene3D Transferase(Phosphotransferase) domain 1 393 537 - -
Sto9g0573 569 MobiDBLite consensus disorder prediction 542 569 - -
Sto9g0573 569 PANTHER OS07G0586332 PROTEIN 324 563 IPR044576 -
Sto9g0573 569 PANTHER OS07G0586332 PROTEIN 1 326 IPR044576 -
Sto9g0573 569 MobiDBLite consensus disorder prediction 549 569 - -
Sto9g0573 569 SUPERFAMILY Protein kinase-like (PK-like) 66 555 IPR011009 -
Sto9g0573 569 Pfam Protein kinase domain 87 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0573 569 ProSiteProfiles Protein kinase domain profile. 83 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0573 569 Gene3D Phosphorylase Kinase; domain 1 58 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0573 Sto-Chr9 5584671 5586890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0573 400 531 Receptor kinase-like Gene Family AT3G58690 31.343 2.76e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Sto9g0573 Pkinase 2.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0573 - - lsv:111910304 541.962