Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0561 ATGGATAAATATTCATCATGGATTAATACTTCCTTGGATCTCAACATTAATCCTAGTTCCAGAGTTCATGAAGAAGTTCCaAAAAAGGAGGTTCAAGGCAATAATTTTTTTGCATTGGAATGGAAATCATCTCCGGCTAAAAAAGAGTCAAGTGGTGATCTGGAGGAAGAACTGAAGAGGGTGAGTGCAGAAAACAAGAAGCTAAATGAAATGCTCTCAGAGATGTGTGATAACTACAATACTCTGAGGAGCCACTTGATGGAGTACATGAGGAAGAATCCAGAGAAGGATGAAATAAGCCCATCAAAGAAGAGGAAGTCTGAAAGtagcaacaacaataataataacaataacaatagtGGCATTCCAATGGGGGCTAATGGAAACTCAGATAGCAGCTCaactgatgaagaagaagattcaAGCAAGAAACCAAGGCAAGAGATCATCAAAGCAAAAATCTCAAAACTTTTTGTCAGGACAGAAGCAAATGATACAAGCCTTATTGTGAAGGATGGATATCAATGGAGAAAGTATGGGCAAAAGGTGACCAGAGATAACCCTTGTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAACCTGCCCTGTTAAAAAGAAGGTACAAAGAAGTGTTGAAGATCAGTCTGTTTTGGTGGCAACTTATGAAGGAGAGCATAATCATTCACAGTCTTCTCAAATTGAAGCAACATCAGGTCCTAATGCTAGAAGTGTGACCCTTGGTGTAGTACCATGTTCTTCCTCTCTGAGACCTAATTCTCCTCCAAAAGTTACACTTGACATCATGACAAAACCCAAGTCCCTAACCGAATCCGAGAACCCGAAACCGAAACTCGATTCGCCGCCGGAAGTCCCGCAGGTTTTCGTGGAGCAGATGGCTACTTCCTTAACCAAGGATCCCAATTTCAGAGCAGCACTTCTTGCAGCCATTTCAGGAAGAATGTCACACAAGAATTAG 978 0.3957 MDKYSSWINTSLDLNINPSSRVHEEVPKKEVQGNNFFALEWKSSPAKKESSGDLEEELKRVSAENKKLNEMLSEMCDNYNTLRSHLMEYMRKNPEKDEISPSKKRKSESSNNNNNNNNNSGIPMGANGNSDSSSTDEEEDSSKKPRQEIIKAKISKLFVRTEANDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPTCPVKKKVQRSVEDQSVLVATYEGEHNHSQSSQIEATSGPNARSVTLGVVPCSSSLRPNSPPKVTLDIMTKPKSLTESENPKPKLDSPPEVPQVFVEQMATSLTKDPNFRAALLAAISGRMSHKN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0561 325 Gene3D WRKY domain 154 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g0561 325 MobiDBLite consensus disorder prediction 41 60 - -
Sto9g0561 325 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 5 325 IPR044810 GO:0003700
Sto9g0561 325 MobiDBLite consensus disorder prediction 251 290 - -
Sto9g0561 325 Coils Coil 51 78 - -
Sto9g0561 325 SMART WRKY_cls 170 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g0561 325 Pfam WRKY DNA -binding domain 171 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g0561 325 MobiDBLite consensus disorder prediction 106 132 - -
Sto9g0561 325 MobiDBLite consensus disorder prediction 92 149 - -
Sto9g0561 325 SUPERFAMILY WRKY DNA-binding domain 167 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g0561 325 ProSiteProfiles WRKY domain profile. 165 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g0561 325 PANTHER TRANSCRIPTION FACTOR 5 325 - -
Sto9g0561 325 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0561 Sto-Chr9 5509596 5511560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0561 1 325 WRKY Transcription Factor Family AT1G80840 50.751 2.38e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g0561 WRKY 1.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0561 - - gmx:100798375 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0561 9 5509596 5511560 Sto9g0561 9 5509596 5511560 ECH