Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0558 ATGTCGGGCCAAAGCCAGCGTCTTAATGTGGTCCCCACTGTGACAATGCTTGGAGTCATGAAAGCTCGCCTATTTCGTCAGATCCTGAAGAAGATAGTGTCCACCAAGGAATCAATGGGAGAGATCATGAAAACTTCTTCTTTTGCTTTGACTGAAGCCAAGTATGTTGCTGGTGACAACATCAAGCATGTTGTGCTTGAGAATGTCAAGGAAGCATCACTTAAGGTTCGTTCTCGACAAGAGAATGTGGCTGGGGTTAAACTCCCTAAGTTTGAATACACAAGTGATGGTGAGATCACTAAGAATGATCTTACTGGGTTGGCAAGAGGTGGCCAACAAGTTCAGCAATGCCGTGCTGCTTACGTTAAGGCAATTGAAGTTCTTGTTGAGCTTGCTTCACTTCAGACATCCTTCTTGACCCTCGATGACGCGATCAAGACAACGAACCGGAGAGTGAACGCGCTTGAGAATGTGGTGAAGCCGAGGTTGGAGAATACCATTAGCTATATCAAGGGAGAGTTAGATGAGCTTGAAAGAGAGGATTTCTTTAGGTTGAAGAAGATACAGGGTTATAAGAAGAGGGAAATAGAGAAACAGATGCAATCGGCTAAGAATTTTGCTGATGAACAAGTTGCTGAGAAGCTGGCATTGCAGAGAGGAATATCATTGAGTTCGGCTCACAATTTGTTGTCTGCCACAATGGCGAAAGATGAGGATATCATTTTCTGA 729 0.4417 MSGQSQRLNVVPTVTMLGVMKARLFRQILKKIVSTKESMGEIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLKVRSRQENVAGVKLPKFEYTSDGEITKNDLTGLARGGQQVQQCRAAYVKAIEVLVELASLQTSFLTLDDAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIEKQMQSAKNFADEQVAEKLALQRGISLSSAHNLLSATMAKDEDIIF 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0558 242 Pfam ATP synthase subunit D 24 189 IPR002699 GO:0046961
Sto9g0558 242 Gene3D - 20 201 - -
Sto9g0558 242 Coils Coil 160 180 - -
Sto9g0558 242 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 25 193 IPR002699 GO:0046961
Sto9g0558 242 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 24 IPR002699 GO:0046961
Sto9g0558 242 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 25 242 IPR002699 GO:0046961
Sto9g0558 242 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 1 24 - -
Sto9g0558 242 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 25 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0558 Sto-Chr9 5468095 5468883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0558 1 242 Primary Pumps ATPases(2) AT3G58730 73.664 2.12e-138 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0558 K02149 - tcc:18612121 405.601