Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0556 ATGGCTGTCACAAGTTCATCTTCTGGGCAGCCGCAGTTCATTGCTAGCACTGGGAACCGAAGCTCTTCCAATGCCCCACTTATCGAGAACTCGGATACTCATCAAATTGTTGTGCCTGATAAGACAAGCTGGAAAAACTTATTTGCTTATATGGGTCCTGGCTTTCTTGTTTCCATTGCATATATAGACCCCGGAAACTTTGAAACTGATCTTCAATCAGGGGCACAATTCAAATATGAGttactTTGGATCATATTGGTTGCATCTTGTGCTGCTCTTATAATTCAATCAATGGCAGCCAATTTGGGAGTTGTCACCGGAAAACATTTAGCCGAGCATTGTAGAACTGAATATCCTCGGAACACTAATTTCGTCCTATGGGTTATTGCTGAAATTGCCATAGTGGCCTGTGACATTCCTGAAGTAATTGGAACAGCCTTTGCATTGAACATGCTCTTCAACATTCCTGTTTGGATCGGTGTTCTTCTGACCGGGCTTAGTACATTGATCCTCTTAGCATTACAGCAATATGGGGTTAGGAAACTTGAATTCTTGATTGCATTTCTGGTATTTACAATTGCTGTGTGCTTTTTTGCCGAGCTCGGGTATGCAAAGCCGGATGCGAAAGAAGTTTTGGAGGGACTTTTTGTGCCGAAACTCAAAGGGAATGGTGCTACTGGTCTTGCCATTTCACTCCTCGGGGCTATGGTTATGCCGCACAATCTCTTCCTCCACTCAGCACTGGTGCTCTCTAGAAAAATACCGCGATCCGTTCACGGAATCAAAGAAGCTTGCAGATTTTACATGATAGAAAGTGCATTTGCTCTCATGGTGGCTTTCCTCATAAACGTCTCGGTCATTTCTGTGAGCGGTGCAGTTTGCAATTCTTCGACTTTGAATGCAGAAGATCAGGCGAGCTGTCAGGATTTGGACTTGAACAAAGCTTCTTTTCTGCTAAGAAATGTTTTGGGAAAATGGAGTTCGAAACTGTTCGCTATCGCTTTGCTCGCATCGGGTCAAAGTTCTACTATAACAGGAACATATGCAGGGCAGTATGTCATGCAGGGATTTCTTGATTTACGACTGACACCATGGATTCGAAACCTCTTAACTCGTTGCTTAGCTATAGTTCCTAGTCTGATCGTCGCGGTCATTGGTGGTTCTGCCGGCGCCGGGAAGTTGATAATTATTGCATCTATGATCTTATCATTTGAGCTTCCTTTTGCTTTGATTCCACTCCTCAAGTTCACCAGCAGCAAAACCAAGATGGGACCCTACGTCAACTCCATTGCGATTTCTGCTGTAACTTGGGTCATTAGTTCACTCATAATGGCCATAAACATATACTACTTAGTGACCGGCTTCATCAAGTTGCTTCTCCATAGTGACATAAAAATGGTAGGCAAGGTGTTTCTggggattttagggttttcggggATAGCGGTATATTTGGCGGCTATCGCGTATCTCGTGTTTCGCAAGAACAGAGAATCTACACATCTTTTGGCACTAACAACACCAGAAAGTAGGCAAATGGAAAATGAACAATGCAATGAATCGATGTATAGTCTTCCAAGAGAAGACATAGTAAATATGCAACTGCCACAAAGAAGTAATCCAGCTAATCTTTGA 1632 0.424 MAVTSSSSGQPQFIASTGNRSSSNAPLIENSDTHQIVVPDKTSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQFKYELLWIILVASCAALIIQSMAANLGVVTGKHLAEHCRTEYPRNTNFVLWVIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLILLALQQYGVRKLEFLIAFLVFTIAVCFFAELGYAKPDAKEVLEGLFVPKLKGNGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVHGIKEACRFYMIESAFALMVAFLINVSVISVSGAVCNSSTLNAEDQASCQDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLTPWIRNLLTRCLAIVPSLIVAVIGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSKTKMGPYVNSIAISAVTWVISSLIMAINIYYLVTGFIKLLLHSDIKMVGKVFLGILGFSGIAVYLAAIAYLVFRKNRESTHLLALTTPESRQMENEQCNESMYSLPREDIVNMQLPQRSNPANL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0556 543 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 10 539 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto9g0556 543 MobiDBLite consensus disorder prediction 1 25 - -
Sto9g0556 543 PANTHER METAL TRANSPORTER NRAMP1 10 539 - -
Sto9g0556 543 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto9g0556 543 Pfam Natural resistance-associated macrophage protein 67 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto9g0556 543 Hamap Divalent metal cation transporter MntH [mntH]. 32 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto9g0556 543 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto9g0556 543 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto9g0556 543 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto9g0556 543 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto9g0556 543 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto9g0556 543 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto9g0556 543 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0556 Sto-Chr9 5408546 5414127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0556 15 537 Inorganic Solute Cotransporters AT1G15960 82.286 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0556 K21398 - gmx:100797298 920.998