Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0555 atGCCTGCTGCTGACACCTCATCGGCCTCCGCCCAAACCATCTGCGTCACCGGCGCCGGTGGATTCATCGCGTCTTGGATCGTCAAGCTTCTCTTAGAGAGAGGCTACACTGTCAGAGGCACTGTGAGAAATCCAGATGATTCCAAGAATGCACACTTGAGGGAGTTGGAAGGAGCAGAAGAGAGGCTAACTCTGCACAAAGTTGATCTTCTCGATCTCGATTCCGTCAAATCTGTTATCAACGGTTGCGATGGCGTCATTCACACGGCTTCTCCAGTCACTGATAATCCCGAAGAGATGGTGGAGCCAGCCGTGAATGGGGCCAAGAATGTGATAATTGCAGCTGCTGAAGCAAAAGTGAGAAGAGTAGTGTTCACGTCATCAATTGGTGCTGTGTACATGGACCCCAACAGGAGCATAGATGTGGTGGTTGATGAGTCTTGCTGGAGTGATTTGGAATATTGCAAGAACACAAAGAACTGGTATTGCTATGGGAAAGCAGTGGCAGAGAAGGCAGCATGGGATGAGGCAAAAGAGAGAGGGGTGGACTTGGTAGTGGTGAACCCTGTGTTGGTGCTTGGACCATTACTACAATCCAACATCAATGCAAGCACAATTCACATCCTCAAGTACCTCACTGGTTCTGCTAAGACCTATGTCAATGCCACTCAGGCTTATGTCCATGTAAGGGATGTGGCATTAGCTCACATTCTGGTTTATGAGACTCCTTCTGCTTCGGGTCGTTACATTTGTGCCGAGAGCTCACTCCATCGGGGAGACCTCATCGAAATTCTTGCCAAATACTTCCCTGAATACCCTGTTCCTACCAAATGTTCAGATGAGAAGAATCCAAGGGCAAAACCCTACACATTCTCTAACCAGAAGCTAAAggatttgggtttggaatttaccCCAGTGAAGCAGTGCCTATACGACACCGTTAAGAGCCTGCAGGAAAAAGGCCACCTTCCTGTCCCTTCTTCTAAGAAAGAATAA 996 0.4729 MPAADTSSASAQTICVTGAGGFIASWIVKLLLERGYTVRGTVRNPDDSKNAHLRELEGAEERLTLHKVDLLDLDSVKSVINGCDGVIHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPNRSIDVVVDESCWSDLEYCKNTKNWYCYGKAVAEKAAWDEAKERGVDLVVVNPVLVLGPLLQSNINASTIHILKYLTGSAKTYVNATQAYVHVRDVALAHILVYETPSASGRYICAESSLHRGDLIEILAKYFPEYPVPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPVKQCLYDTVKSLQEKGHLPVPSSKKE 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0555 331 CDD FR_SDR_e 15 301 - -
Sto9g0555 331 Gene3D - 3 331 - -
Sto9g0555 331 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 8 326 - -
Sto9g0555 331 Pfam NAD dependent epimerase/dehydratase family 14 245 IPR001509 -
Sto9g0555 331 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 326 - -
Sto9g0555 331 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0555 Sto-Chr9 5398093 5402202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0555 11 277 Monolignol Biosynthesis Gene Families AT1G80820 75.281 1.03e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0555 K09753 - gmx:100789070 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0555 9 5398093 5402202 Sto9g0555 9 5398093 5402202 ECH