Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0541 ATGCTAAGGAGCAAAATGGTCTTTATTATCTTGAAACCGACTCCTCCCCAGAAGGACCAATCCATCTTTGAATATAGCCCATTTCCTGAGTTACCTGTCGTGTGCCCTCAAATACAAGACACTGCTTTACAACCCCAACAAATTGATGACCCACCTCAAATCCTTCCTGACCCTGATCCTAATTTGCAACCCAACCAAACTTTGGATTCTGCTCGTCCATTACAGGTTTACTCCCGGAGAAAAGTACCACCTCCTACAAGTGAGCCTGTCCAATCATCGTCTTCGGAGCTCCAAGATGTTGAGGGGACTGAAACAATTCAGAGCATCATTTTGGACAAGCTAAAATCTGTTGGAGTCTTGTCCTTAAATCCTCAAGTCTTTGCTAGGATGCACAAGCTCAAGTTTCTTAAATTGACTCGGGATCTTAGATTGGCGGAAACAGATTTTGTGGATCTACGTGATGGACTTGGATATTTGCCAGATGAACTAAGACTTCTTCATTGGCATGGTTATCCTCAAAAATCCTTGCCTATGACATTTAGTGCAGAATATCTTGTTGAACTTGATCTGAGTTGGAGCAAAGTGGAAAAACTTTGGGATTGGGATGAAGTCAAGTTGTATTTGTCGGGTATACCTTTCAAGGAATTGCCAATTGGATGTCTAAGAAAACTTGAATGTCTTAATCTAGTTGACTGTAAAAGTCTCACACATCTTCCGAGCAATTGTGTTGAACTGAGATCTCTACGCCAGCTTTATGTTACCACTTGCATAAAACTTGTATCTCTACCACTGCTTCCACTATCGATTGAACAAGTAATGGCAGAGTTGTGTATATCCTTGGAAACTGTACAGTTGACTTCAATTAATGGTGATCCTCTCAACAGAAACATGGTTCATATCTTCTTGGGAAACAATGATGATGAGATGTTCACTCTTGACGATAGATGTAGTGAGATGATAAatgaaagaattgaagaaaGCAGAAGGAGTTCTCACAGCATTACTTATATTCCAaagctttcatttcatttccttaCTGGGACAGGTAAGTGTGGGGTGAACCCAATATATGCCAACGAggagaaagaggaagatgagGATTCTATGGTGGAGGAGGATATTGATGATGATTCTGAGAAAAATGAGGAGGATCATGAGGGTTTTGAGGAGGATATTGATGATTCCGAGGAAAATGAGGAGGATGAGGATTTTGAGGAAGATGAGATAGAAGCATTCCCTCCAACCAAGAGATTGAAATAA 1260 0.3913 MLRSKMVFIILKPTPPQKDQSIFEYSPFPELPVVCPQIQDTALQPQQIDDPPQILPDPDPNLQPNQTLDSARPLQVYSRRKVPPPTSEPVQSSSSELQDVEGTETIQSIILDKLKSVGVLSLNPQVFARMHKLKFLKLTRDLRLAETDFVDLRDGLGYLPDELRLLHWHGYPQKSLPMTFSAEYLVELDLSWSKVEKLWDWDEVKLYLSGIPFKELPIGCLRKLECLNLVDCKSLTHLPSNCVELRSLRQLYVTTCIKLVSLPLLPLSIEQVMAELCISLETVQLTSINGDPLNRNMVHIFLGNNDDEMFTLDDRCSEMINERIEESRRSSHSITYIPKLSFHFLTGTGKCGVNPIYANEEKEEDEDSMVEEDIDDDSEKNEEDHEGFEEDIDDSEENEEDEDFEEDEIEAFPPTKRLK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0541 419 MobiDBLite consensus disorder prediction 359 419 - -
Sto9g0541 419 SUPERFAMILY L domain-like 120 339 - -
Sto9g0541 419 Gene3D Ribonuclease Inhibitor 80 289 IPR032675 -
Sto9g0541 419 MobiDBLite consensus disorder prediction 360 409 - -
Sto9g0541 419 Coils Coil 378 398 - -
Sto9g0541 419 MobiDBLite consensus disorder prediction 39 98 - -
Sto9g0541 419 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 116 268 IPR044974 GO:0006952
Sto9g0541 419 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS)-RELATED 116 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0541 Sto-Chr9 5219486 5227112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0541 102 263 WRKY Transcription Factor Family AT4G12020 33.333 9.66e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0541 - - cpap:110823623 114.39