Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0518 ATGATCAACGACGACTTTCTCTTCCTTTCCAAACCACAAACACCTTGCCGCTGGgttccaccaccaccgccgccgccgctaGAAGGTATCGCCGCCGTGGTGGGCCAACACGTGCTCTTCGGACACAAACACACCACCCCCAACGCCCACCTCAACAACCCCAACGGTTTCATCATGGCGGCAAAAAGCAAAGCCCACAAGGTTTGTAGTAGCACCACGGCCGCGGGCGGCGCGTCGAGCACACTCTCGGCGAACAAGAGCTACAGGGGCGTGAGGAAGCGGCCGTGGGGGAGGTGGTCGGCGGAGATACGCGACCGGATCGGGCGGTGCCGGCATTGGCTGGGGACGTTCGACACCGCGGAAGAGGCGGCGCGTGCGTACGACGCGGCCGCGAGGCGACTGAGGGGATCGAAGGCCAGGACCAACTTTGAGATACCTTCGGTGCTGCCATCAGTACTGTCCGTACCATCATCGTCGTCTTCGTGTACTTCTTCGCAAGTGAAAAAGGGTAGTGtgggaaataataataatagtagaaGAAAGTGTTGTGTGGTGACTTCTGTGGCTCAATTGTTCAGTGTGATGCCTGAGGTTAATGTTAGGAGGAATAATggtgataataataatagtaataagtcTAATTCTTCTGGGTTTGGGAATGTGGAATTAGACTTGAAGTTAGTGGCTATAGATAGTAGTCGTCAAGAGTCGGATGTTATTATAAATATAGCTTGTTGCATTTTGGCAGTAGCTGGATTTGCAGTTGCAGTTACAGTCTCAGACAAATCGAAACCACAATCAGAATGGGCCCCCCACAAGTACAACGTTTTTGTTTTTGAGTAG 843 0.484 MINDDFLFLSKPQTPCRWVPPPPPPPLEGIAAVVGQHVLFGHKHTTPNAHLNNPNGFIMAAKSKAHKVCSSTTAAGGASSTLSANKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEIPSVLPSVLSVPSSSSSCTSSQVKKGSVGNNNNSRRKCCVVTSVAQLFSVMPEVNVRRNNGDNNNSNKSNSSGFGNVELDLKLVAIDSSRQESDVIINIACCILAVAGFAVAVTVSDKSKPQSEWAPHKYNVFVFE 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0518 280 PRINTS Ethylene responsive element binding protein signature 88 99 IPR001471 GO:0003700|GO:0006355
Sto9g0518 280 PRINTS Ethylene responsive element binding protein signature 110 126 IPR001471 GO:0003700|GO:0006355
Sto9g0518 280 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 23 213 - -
Sto9g0518 280 CDD AP2 86 145 IPR001471 GO:0003700|GO:0006355
Sto9g0518 280 SMART rav1_2 87 150 IPR001471 GO:0003700|GO:0006355
Sto9g0518 280 ProSiteProfiles AP2/ERF domain profile. 87 144 IPR001471 GO:0003700|GO:0006355
Sto9g0518 280 SUPERFAMILY DNA-binding domain 87 144 IPR016177 GO:0003677
Sto9g0518 280 Gene3D AP2/ERF domain 86 145 IPR036955 GO:0003700|GO:0006355
Sto9g0518 280 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 23 213 - -
Sto9g0518 280 Pfam AP2 domain 87 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0518 Sto-Chr9 4998248 5000240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0518 28 154 AP2-EREBP Transcription Factor Family AT1G80580 57.480 6.00e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sto9g0518 AP2 2.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0518 - - zju:107408884 176.407