Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0514 atggatgatgatgatgatcaccACTTCTCATGCCACACCCACAATATTGACACTACTCCTATCTTTCCTCAACACCATTTGGAAATGGATGATGAAGAGGAGAGTATAAATTTGTTGAATCAATATTGCTTTGAAGAGGATGATGATCTATTGATCAGAAATATATTTGATGATCACCAATCATATTCACATGGAAATACGTTGGAGAGTAATTTCCTGAATAATGATTCCAACAATTTCATTATTTGTGAGGGTACTGGATTAGGTGGGAGTGGTAACACCAACACATACACTCTGTGTTTTGATAACTCAACTGTGTTACCAAACGACGTCGTGGAGGTGGAACATTGTGCTGTGCCCAACACGCATAATAATAAGAAGCAATCTTCTAAGTCTGGGTCCTCGTCTTGCTCCTCAATATCATCGTCTAAACGGAGAGGTAACGGTAACGGAAAGGAGTTAACGGAGGATGCAAGGAAGAAGAGTAGGACTAGAACGTCAGCTGAAACCATTCATCACATCATGGCGGAGAGGAAGAGGAGACAGGATCTCACTCAGAAATTCATTGCCCTTTCTGCCACCATTCCTGGCTTGAAGAAGATAGATAAGGCGTCAGTACTATGCGAAGCCATCAACTACGTGAAACAACTTCaggagagagtgagagagttGGAGAAGATCAACACAgagaaaacaacaacaacaacaaaaagatCCTCaatcacatcatcatcatcatcacatcatcatcatcattcacaAGTGTGCACAAGCAAAGGCGGCGCTACTGCAGCAACAACTACCACCACTACCAACAAATGCAATGTTAATAATGAAGCTGCGAAATGTGATCAAGTATCGGCACTCCCGGAGATGGAAGCAAGAGTGTTAGGAAAACAAGTCCTGATTCGTATTCACTGCCACGTCAGACAACAAAACGACATAATGATGAATGTAATGGCATTTCTTCCGCGCATCCATCTCTCCCTCCTCAGCTGTACGCTTCTGCCCTTTGGGAATTCGGCCTCCACCATCATCACCATTACTGCGCAGATGGAGGATGAATACTGCTTGACGCCCAATGATTTACTCAACCACTTGAACCACCATCATCTCTTCAACGACTCCCATATATGTAGCTAA 1143 0.3928 MDDDDDHHFSCHTHNIDTTPIFPQHHLEMDDEEESINLLNQYCFEEDDDLLIRNIFDDHQSYSHGNTLESNFLNNDSNNFIICEGTGLGGSGNTNTYTLCFDNSTVLPNDVVEVEHCAVPNTHNNKKQSSKSGSSSCSSISSSKRRGNGNGKELTEDARKKSRTRTSAETIHHIMAERKRRQDLTQKFIALSATIPGLKKIDKASVLCEAINYVKQLQERVRELEKINTEKTTTTTKRSSITSSSSSHHHHHSQVCTSKGGATAATTTTTTNKCNVNNEAAKCDQVSALPEMEARVLGKQVLIRIHCHVRQQNDIMMNVMAFLPRIHLSLLSCTLLPFGNSASTIITITAQMEDEYCLTPNDLLNHLNHHHLFNDSHICS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0514 380 Gene3D - 156 232 IPR036638 GO:0046983
Sto9g0514 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 217 IPR011598 GO:0046983
Sto9g0514 380 Coils Coil 214 234 - -
Sto9g0514 380 MobiDBLite consensus disorder prediction 149 178 - -
Sto9g0514 380 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 2 370 - -
Sto9g0514 380 Pfam Helix-loop-helix DNA-binding domain 172 218 IPR011598 GO:0046983
Sto9g0514 380 SMART finulus 174 223 IPR011598 GO:0046983
Sto9g0514 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 171 232 IPR036638 GO:0046983
Sto9g0514 380 MobiDBLite consensus disorder prediction 228 262 - -
Sto9g0514 380 MobiDBLite consensus disorder prediction 122 148 - -
Sto9g0514 380 PANTHER BHLH TRANSCRIPTION FACTOR 2 370 - -
Sto9g0514 380 MobiDBLite consensus disorder prediction 233 262 - -
Sto9g0514 380 MobiDBLite consensus disorder prediction 122 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0514 Sto-Chr9 4977506 4978883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0514 172 356 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 35.676 2.70e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto9g0514 HLH 4.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0514 - - gmx:100808919 167.162