Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0445 ATGGAAGATGCCTCCTGTTGCCACGAACAAGTTCCAGATGGTGAATGCATTGAGGATCAAAAAGAAGATGGTGGATTAACTGAGGTAGATTGTCAGAGTGGGTTTTCTGAAGGAAGAAAGGAGTTTGTTGCACCTGCTGTTGGGATGGAGTTTGAGTCCTATGATGATGCCTACAATTATTATATCTGCTATGCCAAGGAGGTGGGTTTTCGTGTAAGGGTGAAGAATTCCTGGTTCAAGCGAAATAGCAGAGAAAAGTATGGTGCAGTGCTATGCTGTAGCAGCCAgggttttaaaagaataaaagacgTTAACCATTTGAGAAAGGAAACTAGAACCGGTTGTCCTGCTATGATAAGGATGAGGTTAATGGACTCTCAGAGATGGAGGGTACTTGAGGTTACCCTTGAACATAACCACCTTTTAGGTGCTAAGCTATACAGATCAATGAAGAAGATGGGAGTTGGAACCAAAAGGAAGTCCTTGCCTAGTTCTGATGCTGAAGTGCGAACAATTAAGCTATACCGTGCACTTGTGATAGACGCAGGAGGTAATGTAAATTCAAACTCCTCCAGTACTAGAGAATTCAGAACTTGTTTcgatttttctaatcagttgaACCTTAAAAAAGGTGACACACAGGCCATTTATAATTACCTTTGCCGTATGCAACTGACCAATCCAAATTTCTTTTACTTGATGGATTTCAATGATGAAGGACACTTAAGAAATGTATTCTGGGCTGATGCTAGGTCTAGGGCTGCATGTGGCTATTTTGGTGATGTTATTTACTTTGACAGCACATATTtgtcaaataaatatgaaattccTCTTGTGGCTATTGTTGGAATTAATCACCATGGTCAATCAGTGTTATTGGGTTGTGCCCTGCTTGCTGGTGAAACATTAGAATCTTATCAATGGTTGTTCAGAACATGGGTTACATGTATGTCGGGAATTCTTCCCCAAACTATTATCACAGATAGGTGCAAACTTTTGCAGAGTGCAATTGCGGAAAAATTTCCTCGATCGCGTCATTGTTTTGGCTTGTCACTAATCATGAAAAAGGTACCGGAGAAGTTGGGGGGGCTGCACAATTATGATGCAATCAGGAAAGCACTGAATAAAGGTGTTTATGAGACATTAAAAGTGATTGAATTTGAAGCAGCATGGGGATTTATGATTCAGCGTTTTGGAGTTTGTGATCATGAGTGGCTTCGTTCTATCTATGAAGACCGAGTTCGTTGGGCTCCAGTGTACTTGAAGGACACATTTTTCGCTGGAATGTCTGCAACAAGTCCTGGTGAGACCTTGAGTCCATTTTTCGATAGATACGTGCACAAACAGACTCCGTTGAAGGAGTTTCTTGATAAGTATGAACTAGCTCTCCAAAAGAAGTACAAAGAAGAATCTACTGCCGATATtgactcaagaagcacaagtccGTTGCTGAAAACAAGATGTTCTTTTGAATTGCAGCTCTCCAGATTGTACACTAGAGAAATATTCAAGAAGTTTCAATATGAAGTGGAAGAAATGTATTCTTGTTTTAGTACAACACAGCTACACGTGGATGGcccaattataatatttttggtCAAGGAACGTATTTTAAGTGATGGAAATAGAAGGGAGATCAAGGATTTTGAAGTATTGTACAACAGGACAGCCGGTGAAGTTCGCTGCATATGTAGCTGCTATAACTTCAATGGATATTTATGTAGGCATGCTCTGTGTGTTCTCAATTTTAATGGGGTGGAGGAGATACCATCCAAGTACATTCTTTCGCGATGGAAAAAAGATTACAAGCGTCTTCATGTCCCTGATCACAACTTCGGTATCGTCGATGAGACGGACCGTACTCAATGGTTTAATCAGTTATTTAGAAGTGCCTTGCAAGTTGTGGAGGAAGGGGCAATTTCTCTAGACCATTACAATGTAGCTTTGCATGCTTTTCAGGATTCTTTGAAATCCGCAGAGAGTGTGGATACAGGTATAGACAAGATATCAGACGCCATTCTTGACAAAGTCGGTCCATCTTCTGCATCAAGAAGAGAACCATCAAAAGTAGTGTCTGGACATGGCTCTGTCTTGATCATACCTTCATTCCCTTCATCCCCATTTGATGCGAGTCATTCTGAAACCAGGGTCAGAAGTATCGAAGCAAACAAAGACTTCCTTCAATTCACAGGCCGCGACAAGCATATGGTTGACTCGTCCAGGAATCCCATCAATGAGATTCAAAAGGTTTTGCTTCTCTCTGAGATTCCCAAGGCAATGTGCCGCTTCAGATGGCTCGTCCCAGCTACTTTAGAGCCAGTTATGTTGCTCAGTGTCATTAACAGGGTTTATAAGAGGTACAATCTCCATGGTAGCAGGTACAATCCTGAAAAAAGGAATGGTGCAATAAAGGACAATTAA 2421 0.3969 MEDASCCHEQVPDGECIEDQKEDGGLTEVDCQSGFSEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNHLRKETRTGCPAMIRMRLMDSQRWRVLEVTLEHNHLLGAKLYRSMKKMGVGTKRKSLPSSDAEVRTIKLYRALVIDAGGNVNSNSSSTREFRTCFDFSNQLNLKKGDTQAIYNYLCRMQLTNPNFFYLMDFNDEGHLRNVFWADARSRAACGYFGDVIYFDSTYLSNKYEIPLVAIVGINHHGQSVLLGCALLAGETLESYQWLFRTWVTCMSGILPQTIITDRCKLLQSAIAEKFPRSRHCFGLSLIMKKVPEKLGGLHNYDAIRKALNKGVYETLKVIEFEAAWGFMIQRFGVCDHEWLRSIYEDRVRWAPVYLKDTFFAGMSATSPGETLSPFFDRYVHKQTPLKEFLDKYELALQKKYKEESTADIDSRSTSPLLKTRCSFELQLSRLYTREIFKKFQYEVEEMYSCFSTTQLHVDGPIIIFLVKERILSDGNRREIKDFEVLYNRTAGEVRCICSCYNFNGYLCRHALCVLNFNGVEEIPSKYILSRWKKDYKRLHVPDHNFGIVDETDRTQWFNQLFRSALQVVEEGAISLDHYNVALHAFQDSLKSAESVDTGIDKISDAILDKVGPSSASRREPSKVVSGHGSVLIIPSFPSSPFDASHSETRVRSIEANKDFLQFTGRDKHMVDSSRNPINEIQKVLLLSEIPKAMCRFRWLVPATLEPVMLLSVINRVYKRYNLHGSRYNPEKRNGAIKDN 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0445 806 Pfam MULE transposase domain 262 356 IPR018289 -
Sto9g0445 806 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 21 660 - -
Sto9g0445 806 Pfam FAR1 DNA-binding domain 59 142 IPR004330 -
Sto9g0445 806 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 21 660 IPR031052 GO:0006355
Sto9g0445 806 Pfam SWIM zinc finger 559 581 IPR007527 GO:0008270
Sto9g0445 806 SMART 26again6 560 587 IPR006564 GO:0008270
Sto9g0445 806 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0445 Sto-Chr9 4340113 4345373 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto9g0445 MULE 4.5e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0445 - K17604 gmx:100796448 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0445 9 4340113 4345373 Sto9g0445 9 4340113 4345373 ECH