Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0423 ATGGCGCAGATTTTGCTACATGGGACTCTCCATGTCACGATCTTTGAGGTGGATAGGCTGaagagtggtggtggtggtaataTCTTCAGTCAGCTGAAGGAAAATCTTGAGGAGGCAGTTGGTTTTGGAAAGGGAGTTACTAAACTCTATGCAACCGTCGATCTTGAGAAGGCAAGAGTGGGAAGGACTAGAATTATAGAAAAAGAACATACCAATCCAAGGTGGTACGAGTCTTTTCACATCTACTGTGCTCATATGGCTTCTAATGTTATATTCACCGTGAAAGATGATAATCCTATTGGGGCTACTTTAATTGGAAGAGCATATGTGCCTGTTGAGGAAATCTTGGATGGTGAAGAAATAGACAGATGGGTTGAAATCTTGGATGAGCACAAGAATCCTATACACGGGGGTTCAAAGATCCATGTGAAGCTGCAATATTTTGATGTCACAAAAGACCGCAGCTGGGCTCGTGGTGTTAGAAGTGGTAAATATCCTGGAGTACCCTACACTTACTTCTCACAAAGACAAGGATGTAAGATCTCTCTATACCAAGATGCTCATGTCCCAgataattttgtccctaaaataCCTCTTGCTGGAGGTGAGAAGTATGCGCCTCATAGATGTTGGGAGGATGTTTTTGATGCTATCACTAATGCCAAGCACCTAATATACATTACTGGTTGGTCTGTTTATACTGAAATTTCCTTGGTAAGGGATTCTAGGAGGCCAAAGCCTGGGGGAGACATAACACTTGGCGAGCTTCTCAAGAAAAGGGCAAGTGAAGGTGTTAGGGTTTTAATGCTTGTTTGGGATGATAGAACATCTGTTGGTTTGTTGAAAAAAGACGGATTGATGGCTACTCATGATGAAGAAACTGAGCATTACTTCCAGAACACAGATGTGCATTGTGTTTTATGCCCCCGCAATCCTGATGATGGTGGAAGCATCGTTCAAGATTTGCAAATTTCCACCATGTTCACACATCACCAGAAGATTGTGGTGGTAGACAGTGAGTTGCCAAGTGGAGATTCAGAGAGGCGAAGAATTGTTAGTTTTGTTGGGGGTATTGATCTCTGTGACGGAAGATATGATTCTCCCTTCCACACACTTTTCAGAACCCTGGACACAGCACACCATGATGACTTCCACCAACCCAACTTCCCTGGTGCTGCAATCACAAAAGGTGGTCCCAGGGAACCTTGGCACGACATCCACTCCCGACTCGAAGGACCCATTGCTTGGGATGTTTTGTTTAACTTTGAGCAGAGGTGGAAGAAGCAAGGTGGGAAAGATATACTTGTTAACTTGAGAGAGCTTCAAGATGTCATTATTCCTCCATCCCCAGTGATGTTTCCTGAGGATCATGAGACATGGAATGTTCAGTTATTTAGATCTATCGATGAAGGGGCTGCTTTCGGGTTTCCAGAGTCTCCTGAAGATGCTGCCAAGGCTGGTCTTATTAGCGGGAAGGACAATATCATTGATCGCAGTATTCAAGATGCTTATATTCATGCCATTCGACGGGCGAAGAATTTCATCTATATTGAAAATCAATACTTCCTTGGAAGCTCTTTCGCTTGGAGCGCCGATGATATCAAGCCTGAGGACATTAATGCTTTGCATGTAATCCCAAAGGAGCTTTCACTTAAAATTGTTAGCAAGATTGAAGCTGGGGAAAGGTTCACTGTGTACGTTGTGATGCCTATGTGGCCTGAGGGTGTCCCAGAAAGTGCATCTGTGCAAGCAATATTGGACTGGCAGAGGAGGACAATGGAGATGATGTACAAAGATGTTATTCAGGCACTCAAGGCCAAGGGAATTGTGGAAGATCCTCGAAACTATTTGACATTCTTCTGCCTCGGTAATCGTGAGCTGAAGAAACCTGGAGAATATGAGCCTTCAGAAAGACCCGATGAGGATTCAGATTACATGAGAGCCCAAGAGGCCCGGCGCTTCATGATTTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATAGGATCTGCCAACATCAACCAGAGATCAATGGATGGTGCCAGAGACTCTGAGATTGCCATGGGTGCTTATCAACCCTATCACTTGGCTCACAGGCAGCCTGCACGAGGCCAGATCCATGGTTTCCGCATGTCGTTGTGGTACGAGCACCTCGGCATGATTCATGACTCCTTCTTGCAACCTGAAAGTGAAGAATGTGTACGAAAGGTGAACCAGGTTGCTGACAAGTACTGGGATCTCTATTCGAGCGAGTCACTCGAACACGACCTTCCCGGACACCTGCTTCGCTATCCCATTGGAATCGCCAGCGAAGGAGAAATTACCGAGCTTCCGGGATTCGAATTCTTCCCCGATACCAAGGCTCGTGTTCTTGGTGGCAAAGCTGACTACATGCCACCAATCCTTACAACTTAG 2427 0.4442 MAQILLHGTLHVTIFEVDRLKSGGGGNIFSQLKENLEEAVGFGKGVTKLYATVDLEKARVGRTRIIEKEHTNPRWYESFHIYCAHMASNVIFTVKDDNPIGATLIGRAYVPVEEILDGEEIDRWVEILDEHKNPIHGGSKIHVKLQYFDVTKDRSWARGVRSGKYPGVPYTYFSQRQGCKISLYQDAHVPDNFVPKIPLAGGEKYAPHRCWEDVFDAITNAKHLIYITGWSVYTEISLVRDSRRPKPGGDITLGELLKKRASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETEHYFQNTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSELPSGDSERRRIVSFVGGIDLCDGRYDSPFHTLFRTLDTAHHDDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWKKQGGKDILVNLRELQDVIIPPSPVMFPEDHETWNVQLFRSIDEGAAFGFPESPEDAAKAGLISGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADDIKPEDINALHVIPKELSLKIVSKIEAGERFTVYVVMPMWPEGVPESASVQAILDWQRRTMEMMYKDVIQALKAKGIVEDPRNYLTFFCLGNRELKKPGEYEPSERPDEDSDYMRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLAHRQPARGQIHGFRMSLWYEHLGMIHDSFLQPESEECVRKVNQVADKYWDLYSSESLEHDLPGHLLRYPIGIASEGEITELPGFEFFPDTKARVLGGKADYMPPILTT 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0423 808 Pfam Phospholipase D Active site motif 655 681 IPR001736 GO:0003824
Sto9g0423 808 Pfam Phospholipase D Active site motif 326 364 IPR001736 GO:0003824
Sto9g0423 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 364 IPR001736 GO:0003824
Sto9g0423 808 PANTHER PHOSPHOLIPASE D 2 808 IPR015679 -
Sto9g0423 808 SUPERFAMILY Phospholipase D/nuclease 488 738 - -
Sto9g0423 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Sto9g0423 808 SUPERFAMILY Phospholipase D/nuclease 151 446 - -
Sto9g0423 808 SMART C2_3c 9 124 IPR000008 -
Sto9g0423 808 SMART pld_4 326 364 IPR001736 GO:0003824
Sto9g0423 808 SMART pld_4 654 681 IPR001736 GO:0003824
Sto9g0423 808 PANTHER PHOSPHOLIPASE D ALPHA 1 2 808 - -
Sto9g0423 808 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Sto9g0423 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 654 681 IPR001736 GO:0003824
Sto9g0423 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 150 IPR035892 -
Sto9g0423 808 CDD PLDc_pPLDalpha_2 492 701 - -
Sto9g0423 808 Gene3D Endonuclease Chain A 479 700 - -
Sto9g0423 808 Gene3D C2 domain 6 158 IPR035892 -
Sto9g0423 808 Gene3D Endonuclease Chain A 200 443 - -
Sto9g0423 808 Pfam Phospholipase D C terminal 727 797 IPR024632 -
Sto9g0423 808 Pfam C2 domain 8 127 IPR000008 -
Sto9g0423 808 CDD C2_plant_PLD 2 148 - -
Sto9g0423 808 CDD PLDc_pPLDalpha_1 201 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0423 Sto-Chr9 4158341 4163519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0423 1 808 Phospholipase D Gene Family (Wang group) AT3G15730 81.605 0.0 1422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0423 K01115 - gmx:100786410 1530.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0423 9 4158341 4163519 Sto1g0170 1 1226203 1229276 CCT
Sto9g0423 9 4158341 4163519 Sto1g0170 1 1226203 1229276 ECH
Sto9g0423 9 4158341 4163519 Sto9g0423 9 4158341 4163519 ECH