Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0375 ATGAAGAAAGAAAACATTGGCACGTCAAAAGCTAGAGAGCTTCCTGGTCGTTTGACTCGTGCTCAAGCTGCAGCCTTTCGTGCATCTGGACAGCTGCCCCCTCTGAAGGAGCCAACACAACAAATTCAGAAGCAATTACGAGCTAATGCAAAAAGAGCAGCTTCTGATAAAGCATGTCCTCAGCCTAAAAAGAGGGCTGTTCTTCGTGATGTCACCAATGTCACCAGTGTTTTCTGTGAAAATTCATATAGGAACTGTTTCAATGCATCTAAAATTCAGGCTAAGAAAAGCAAGCTGGCTAAGATTGGTCAAGCTAATATTTCCAAAGTGGCTCCTTCAGTTTATGTGGAGCTACCACAACTTCAAATTGACTCAAAACCAAAGAGGTTACCTGAAACAGAACTTATATCAGAAGATGCTACCTGTTCAAGTAATTTGAAAGACAATTCCCTTCATCAGCCAAGTGACAACAGCGCGTGCGGAAGATATGATAGTATGCTTGGAGGTCAAACACCTGGATTAGCTCCTAAGCCTCTAATTTCTCAAAAAGCCAGGAAAGGTAGCCTTTCTGAACTCCTTAGTGCATCGAAGGATCCAGATATCACTGATATAGATGCTGATCATGAAGATCCTCAGTTATGCAGCGACTATGCTCTTGATATCTATGACAACTTACGTGTTTCTGAGCTTGCAAGAAGGCCTTGTCATAACTTCATGGAAACAGTACAGCGAGATATCACTCAAAGCATGCGCGGGATATTAATTGATTGGCTTGTAGAGGTTTCTGAGGAATATAAACTGGTTCCAGATACTTTGTACCTCACTGTATATCTCATAGATTGGTTTCTTTCCAAAAATTACATCGAAAGACAAAGACTTCAGCTGCTTGGCATCACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATTTGCCCGCCACGAATTGAAGAATTCTGCTTCATGACAGACAACACATACACGAAAGATGAGGTACTTAAAATGGAGACTGAAGTGTTGAAGTGCTCCAAATTTCAACTGTTTTCTCCCACTACAAAAACTTTCCTCAGGAGGTTTCTTAGAGCGGCGCAAGCTTCTTACAAGAGCCCTAGCCTTGAATTGGAATATCTGGCCAATTTCCTAGCTGAATTAGCCTTGATGGACTATGGTTTCTTAACCTTCCTCCCTTCTATTATTGCTGCATCAGCTGTATTTCTTGCCAGATGGACATTAAATCAGTCATACCATCCATGGAATCAAACTCTTGAACACTATGCAAGTTACAAAGCATCAGATTTGAAGACCACAGTTCTTGCATTACGAGATCTGCAGATGAACACCAATGGCTGCCCGTTAAGCGCCATTCGCATGAAGTATAGGCAAGAAAAGTTCAAATTTGTAGCAGCAATGTCTTCACCAAAACTGCTGGAAACTCTGTTCTGA 1440 0.4174 MKKENIGTSKARELPGRLTRAQAAAFRASGQLPPLKEPTQQIQKQLRANAKRAASDKACPQPKKRAVLRDVTNVTSVFCENSYRNCFNASKIQAKKSKLAKIGQANISKVAPSVYVELPQLQIDSKPKRLPETELISEDATCSSNLKDNSLHQPSDNSACGRYDSMLGGQTPGLAPKPLISQKARKGSLSELLSASKDPDITDIDADHEDPQLCSDYALDIYDNLRVSELARRPCHNFMETVQRDITQSMRGILIDWLVEVSEEYKLVPDTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEICPPRIEEFCFMTDNTYTKDEVLKMETEVLKCSKFQLFSPTTKTFLRRFLRAAQASYKSPSLELEYLANFLAELALMDYGFLTFLPSIIAASAVFLARWTLNQSYHPWNQTLEHYASYKASDLKTTVLALRDLQMNTNGCPLSAIRMKYRQEKFKFVAAMSSPKLLETLF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0375 479 Pfam Cyclin, N-terminal domain 220 346 IPR006671 -
Sto9g0375 479 CDD CYCLIN 349 439 IPR013763 -
Sto9g0375 479 Gene3D - 234 347 - -
Sto9g0375 479 Gene3D - 220 468 - -
Sto9g0375 479 SMART Cyclin_C_2 349 472 IPR004367 -
Sto9g0375 479 SUPERFAMILY Cyclin-like 209 346 IPR036915 -
Sto9g0375 479 SMART cyclin_7 256 340 IPR013763 -
Sto9g0375 479 SMART cyclin_7 353 441 IPR013763 -
Sto9g0375 479 PANTHER CYCLIN-A2-4 44 479 - -
Sto9g0375 479 PANTHER CYCLINS 44 479 IPR039361 -
Sto9g0375 479 CDD CYCLIN 250 339 IPR013763 -
Sto9g0375 479 PIRSF Cyclin_A_B_D_E 24 478 IPR039361 -
Sto9g0375 479 MobiDBLite consensus disorder prediction 146 167 - -
Sto9g0375 479 MobiDBLite consensus disorder prediction 146 160 - -
Sto9g0375 479 Pfam Cyclin, C-terminal domain 349 471 IPR004367 -
Sto9g0375 479 SUPERFAMILY Cyclin-like 349 474 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0375 Sto-Chr9 3585303 3591770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0375 1 479 Core Cell Cycle Gene Families AT1G80370 55.670 1.40e-173 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0375 K06627 - gmx:100789757 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0375 9 3585303 3591770 Sto9g0375 9 3585303 3591770 ECH