Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0373 ATGTCGGGGCCGGAGAACCAAGCGCACCACGACGACGTCGTCGAGGTGAAGCTGACGCTGGGCCTTCCCGGCGCCAAAGCGGGCACGAAACGTGGCTTCTCGGAGACCGTTGATCTTCCGTCCGGAAGATCAGACGGCAATAACAACAATAGCCTTGTCTCGGCTAAATCTGGCGCACCAAAGGGATCGGAGACGGTGGGGTGGCCGCCGGTGAGGGCGGCGAGGCGGAGGAACGTGATGAAGAGGTGCAAGTACGTGAAGGTGGCGGTGGACGGAGCACCGTATCTGAGAAAAGTGGATCTTGAAGTGTATGGGAGTTATGAGGACCTCATGAAGGCTTTAGAGACCATGTTTTCCTGCATCACTATCCGCAATGATTTGAATGAGAGGAAGGTAATTGTAATGGAGAGTGGGAAGAATATTAATGGATCAGTGGAATACATGCCTACTTATGAGGACAAAGATGGTGATTGGATGATGGTGGGAGATGTACCATGGAAGATGTTTGTGGAATCATGCAAGAGAATCAGGTTGATGATAAGCTCAGATGCCAATACTGGATTAGATCCAAGGACAGCTTCAAggtga 588 0.5102 MSGPENQAHHDDVVEVKLTLGLPGAKAGTKRGFSETVDLPSGRSDGNNNNSLVSAKSGAPKGSETVGWPPVRAARRRNVMKRCKYVKVAVDGAPYLRKVDLEVYGSYEDLMKALETMFSCITIRNDLNERKVIVMESGKNINGSVEYMPTYEDKDGDWMMVGDVPWKMFVESCKRIRLMISSDANTGLDPRTASR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0373 195 SUPERFAMILY CAD & PB1 domains 79 180 - -
Sto9g0373 195 Pfam AUX/IAA family 26 191 IPR033389 -
Sto9g0373 195 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 185 IPR003311 GO:0005634|GO:0006355
Sto9g0373 195 MobiDBLite consensus disorder prediction 40 58 - -
Sto9g0373 195 PANTHER AUXIN-RESPONSIVE PROTEIN 11 185 - -
Sto9g0373 195 Gene3D - 78 190 - -
Sto9g0373 195 MobiDBLite consensus disorder prediction 24 70 - -
Sto9g0373 195 ProSiteProfiles PB1 domain profile. 83 185 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0373 Sto-Chr9 3573673 3575080 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0373 47 178 B3 DNA Binding Superfamily AT1G59750 31.818 1.13e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Sto9g0373 AUX_IAA 6.2e-45 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0373 K14484 - cit:102606903 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0373 9 3573673 3575080 Sto9g0373 9 3573673 3575080 ECH