Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0370 atggggaaGGAAGAATTGGGAGTTGGATTGGAGATGACGGAGCTAAGGCTGGGTCTTCCGGGGAGGGAGAATTCCAAAAAGAGGTTGTTTTCGGAGATTGATGGTGGTGACGACGGTGGTAGTGGTGAAAATAGGTGGTGTGATGATCGGAGGAAGGTGGTggcggaggaggaggaggaggggaggaGGAAGAACCACGCGGTGGTGGGGTGGCCGCCGGTGTGCTCATACCGGAGGAAGGAACTGAAtaataacaatattaataataataaaatgtacGTGAAAGTGAGTATGGATGGAGCTCCTTTCTTAAGGAAAATTGATTTGGGGATGTACAAGGATTATTCACAACTCGCTTTCGCCTTGGAGAACCTCTTTTCTTGCTATGGAATCGGGGAGGCATTGAAGGATgcagagaaaagtgaagaggtTCCCATTTATGAGGACAAAGATGGAGATTGGATGCTGGTTGGAGATGTCCCTTGGGAGTAA 492 0.4106 MGKEELGVGLEMTELRLGLPGRENSKKRLFSEIDGGDDGGSGENRWCDDRRKVVAEEEEEGRRKNHAVVGWPPVCSYRRKELNNNNINNNKMYVKVSMDGAPFLRKIDLGMYKDYSQLAFALENLFSCYGIGEALKDAEKSEEVPIYEDKDGDWMLVGDVPWE 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0370 163 PANTHER AUXIN-RESPONSIVE PROTEIN IAA6 7 163 - -
Sto9g0370 163 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 163 IPR003311 GO:0005634|GO:0006355
Sto9g0370 163 Gene3D - 85 163 - -
Sto9g0370 163 Pfam AUX/IAA family 51 163 IPR033389 -
Sto9g0370 163 SUPERFAMILY CAD & PB1 domains 85 163 - -
Sto9g0370 163 ProSiteProfiles PB1 domain profile. 91 163 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0370 Sto-Chr9 3549539 3550692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0370 80 162 B3 DNA Binding Superfamily AT4G23980 36.145 4.51e-08 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Sto9g0370 AUX_IAA 5.2e-32 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0370 K14484 - gmx:100811879 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0212 1 1573591 1575814 Sto9g0370 9 3549539 3550692 CCT
Sto9g0370 9 3549539 3550692 Sto9g0370 9 3549539 3550692 ECH