Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0361 ATGCACTCGTCGCATCGTCTCCTCCATGACTCGGTTCAGGATCTCCTCCGTACGCCGGGTAGTCGAAAGTACATGAATGTTGTCGACAATGAAAGGAGGAAGTtgagaattagaattagaatgaTCTTGAAGCAGAGATTGAAGGCGAGACATAATATTAATAATAATCATCATTACCAACGTTTGTTGCCTTTGATTGTGAACGTTTATGTTCCTTCTCTTAACGTTTCGGTCCCTTCTCTTATGGCTTCTGGATTTGTTGAATTTGAGGAAGATGACAATGATTATTATGATCATGAAGATTGGTTCCAGCCATCTGTGGGACCACGAGATTCATCGTTCGAGAAAGTTATAGCGTCGCTTAACAAAGTCGAAGTAATCAATTGCAAATCGGTTAAACAGTGCAGTATCTGTCTAGAAGATTTTAAGCGAGGCAACGATGTTTCAGGAACGCCGTGCAAACATGTCTTTCACAGAGATTGCATTGTACAATGGCTGAAGGAAAGTCATGTGTATCCTTTATGTCGTTTTCGAATGCCTTTGGTCAAGTGA 552 0.4004 MHSSHRLLHDSVQDLLRTPGSRKYMNVVDNERRKLRIRIRMILKQRLKARHNINNNHHYQRLLPLIVNVYVPSLNVSVPSLMASGFVEFEEDDNDYYDHEDWFQPSVGPRDSSFEKVIASLNKVEVINCKSVKQCSICLEDFKRGNDVSGTPCKHVFHRDCIVQWLKESHVYPLCRFRMPLVK 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0361 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 181 IPR013083 -
Sto9g0361 183 PANTHER F6A14.12 PROTEIN-RELATED 58 180 - -
Sto9g0361 183 Pfam Ring finger domain 134 176 IPR001841 -
Sto9g0361 183 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 58 180 - -
Sto9g0361 183 ProSiteProfiles Zinc finger RING-type profile. 135 176 IPR001841 -
Sto9g0361 183 SUPERFAMILY RING/U-box 134 180 - -
Sto9g0361 183 SMART ring_2 135 175 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0361 Sto-Chr9 3438694 3442779 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0361 133 177 C3H Transcription Factor Family AT3G58720 57.778 2.82e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0361 - K22378 fve:101301942 95.9005